RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 NCAPG2Q86XI2 1143 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 TAF4BQ92750 862 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 KCNN1Q92952 543 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 CCDC127Q96BQ5 260 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 OTUD5Q96G74 571 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 TAF1DQ9H5J8 278 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 TMEM8AQ9HCN3 771 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 RBM12Q9NTZ6 932 aaKnown RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 ZHX1Q9UKY1 873 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 IQCA1LA6NCM1 817 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 LRRIQ3A6PVS8 624 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 HNRNPDLO14979 420 aaKnown RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 ZMYND10O75800 440 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 UBA1P22314 1058 aaKnown RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 MATR3P43243 847 aaKnown RBP eCLIP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 POLGP54098 1239 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 MAP2K1Q02750 393 aaPredicted RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 USP37Q86T82 979 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 AGPAT1Q99943 283 aa21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 DHX33Q9H6R0 707 aaKnown RBP21.34■■□□□ 1.01
PCDHB11-202ENST00000624887 GTF2H1P32780 548 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 DNA2P51530 1060 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 CYP24A1Q07973 514 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 GLE1Q53GS7 698 aaKnown RBP21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 ANKRD13AQ8IZ07 590 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 SYCE1Q8N0S2 351 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 GPD1LQ8N335 351 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 RFFLQ8WZ73 363 aa21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 NIFKQ9BYG3 293 aaKnown RBP21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 ASCC2Q9H1I8 757 aaPredicted RBP21.33■■□□□ 1.01
PCDHB11-202ENST00000624887 SCP2P22307 547 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 CTNNBL1Q8WYA6 563 aaPredicted RBP21.32■■□□□ 1
PCDHB11-202ENST00000624887 SEMA4DQ92854 862 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 CDCA5Q96FF9 252 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 CLMNQ96JQ2 1002 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 PBKQ96KB5 322 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 GOLPH3Q9H4A6 298 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 DMGDHQ9UI17 866 aaKnown RBP21.32■■□□□ 1
PCDHB11-202ENST00000624887 SPDYE5A6NIY4 337 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 TMCO5BA8MYB1 307 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 CNMDO75829 334 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 FARP2O94887 1054 aaPredicted RBP21.32■■□□□ 1
PCDHB11-202ENST00000624887 OAS2P29728 719 aaKnown RBP21.32■■□□□ 1
PCDHB11-202ENST00000624887 GPC3P51654 580 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 TERF2Q15554 542 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 HDAC7Q8WUI4 952 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 BICD1Q96G01 975 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 CEP89Q96ST8 783 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 POP1Q99575 1024 aaKnown RBP21.32■■□□□ 1
PCDHB11-202ENST00000624887 PORCNQ9H237 461 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 STXBP5LQ9Y2K9 1186 aa21.32■■□□□ 1
PCDHB11-202ENST00000624887 GSTTP1A0A1W2PQM5 241 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 ANKRD62A6NC57 917 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 KCNK3O14649 394 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 TGFB3P10600 412 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 NF2P35240 595 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 GPS2Q13227 327 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 NEDD9Q14511 834 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
PCDHB11-202ENST00000624887 PALB2Q86YC2 1186 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 FAM71AQ8IYT1 594 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 SLC35G2Q8TBE7 412 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 SLC20A1Q8WUM9 679 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 KAT5Q92993 513 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 KREMEN1Q96MU8 473 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 PAGR1Q9BTK6 254 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 VIPAS39Q9H9C1 493 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 SUCLA2Q9P2R7 463 aaPredicted RBP21.31■■□□□ 1
PCDHB11-202ENST00000624887 AGTPBP1Q9UPW5 1226 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 KCNH4Q9UQ05 1017 aa21.31■■□□□ 1
PCDHB11-202ENST00000624887 SLC25A27O95847 323 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 ZBTB48P10074 688 aaPredicted RBP21.3■■□□□ 1
PCDHB11-202ENST00000624887 MYBL2P10244 700 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 MFAP3P55082 362 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 C8orf74Q6P047 294 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 PEX26Q7Z412 305 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 PPM1KQ8N3J5 372 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 FBXL13Q8NEE6 735 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 TMEM143Q96AN5 459 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 SEPT11Q9NVA2 429 aaKnown RBP21.3■■□□□ 1
PCDHB11-202ENST00000624887 TAS2R14Q9NYV8 317 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 STIM2Q9P246 746 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 LRRC37A2A6NM11 1700 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 ARL2P36404 184 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 NAMPTP43490 491 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.3■■□□□ 1
PCDHB11-202ENST00000624887 DAAM2Q86T65 1068 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 NT5DC3Q86UY8 548 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 PNMA8AQ86V59 439 aaPredicted RBP21.3■■□□□ 1
PCDHB11-202ENST00000624887 USP38Q8NB14 1042 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 ASAP3Q8TDY4 903 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 SLC7A3Q8WY07 619 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 SHC3Q92529 594 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 PCYT2Q99447 389 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 KIAA1586Q9HCI6 787 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 PDE11AQ9HCR9 933 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 OSGEPQ9NPF4 335 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 TOPORSQ9NS56 1045 aaPredicted RBP21.3■■□□□ 1
PCDHB11-202ENST00000624887 RAB20Q9NX57 234 aa21.3■■□□□ 1
PCDHB11-202ENST00000624887 STYXL1Q9Y6J8 313 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms