RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 PDCL3Q9H2J4 239 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 TBC1D7Q9P0N9 293 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 WRAP73Q9P2S5 460 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 HCSTQ9UBK5 93 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 ZKSCAN5Q9Y2L8 839 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 PCDHA10Q9Y5I2 948 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SCN5AQ14524 2016 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SDK1Q7Z5N4 2213 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 IGLV3-22A0A075B6J6 115 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 METTL12A8MUP2 240 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 RSPH10B2B2RC85 870 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 EDIL3O43854 480 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 ZNF862O60290 1169 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 RSPH10BP0C881 870 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CKBP12277 381 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SP100P23497 879 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CCT6AP40227 531 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 POLGP54098 1239 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 OSTNP61366 133 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 HMGN5P82970 282 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 GLIPR1L2Q4G1C9 344 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 FAM102BQ5T8I3 360 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CCSAPQ6IQ19 270 aaPredicted RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 EFCAB12Q6NXP0 572 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 MSL3Q8N5Y2 521 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 DEFB123Q8N688 67 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SNX29Q8TEQ0 813 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CDK5RAP3Q96JB5 506 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CDHR1Q96JP9 859 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CLIC4Q9Y696 253 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 A0A0G2JMZ2 1700 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 NPHP3-ACAD11A0A0J9YXS1 232 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 LRRIQ4A6NIV6 560 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 WDR64B1ANS9 1081 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 M0QZ92 97 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 DNAJC6O75061 913 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 TNFRSF21O75509 655 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 KRT18P05783 430 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 PSAPP07602 524 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SUPT20HL2P0C7V6 817 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 KCNJ6P48051 423 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 USP49Q70CQ1 688 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 LRRC8DQ7L1W4 858 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 TMEM199Q8N511 208 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 LENG9Q96B70 501 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 INTS4Q96HW7 963 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 NOC4LQ9BVI4 516 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 IFIH1Q9BYX4 1025 aaKnown RBP5.5□□□□□ -1.53
SYCP1-209ENST00000613524 SMARCAD1Q9H4L7 1026 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 GTF2IRD1Q9UHL9 959 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 CDY2AQ9Y6F7 541 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 ELP1O95163 1332 aa5.5□□□□□ -1.53
SYCP1-209ENST00000613524 BDP1A6H8Y1 2624 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 LCHNA4D1U4 455 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 E9PMD0 336 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 INO80B-WBP1J3KQ70 363 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 EREGO14944 169 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 KLF4O43474 513 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 GADD45BO75293 160 aaPredicted RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 MBD3O95983 291 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 F2P00734 622 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 FGBP02675 491 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 MATR3P43243 847 aaKnown RBP eCLIP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 MCM2P49736 904 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 STK38Q15208 465 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 FAM160B1Q5W0V3 765 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 UBE2Q1Q7Z7E8 422 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 TDHQ8IZJ6 230 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 ANKLE1Q8NAG6 615 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 HAS1Q92839 578 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 LGR4Q9BXB1 951 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 BCO2Q9BYV7 579 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 INO80BQ9C086 356 aaPredicted RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 PRDM12Q9H4Q4 367 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 DDX19AQ9NUU7 478 aaKnown RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 CACNG4Q9UBN1 327 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 LRWD1Q9UFC0 647 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 R3HCC1Q9Y3T6 440 aaKnown RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 KIF3AQ9Y496 699 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 CCDC169A6NNP5 214 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 SMAD7O15105 426 aaKnown RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 STX6O43752 255 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 NBNO60934 754 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 LILRA1O75019 489 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 TIMP1P01033 207 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 CA3P07451 260 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 CELA3AP09093 270 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 TGFB3P10600 412 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 ATP4AP20648 1035 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 SMARCA1P28370 1054 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 CASP1P29466 404 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 ME1P48163 572 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 EVCP57679 992 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 KARSQ15046 597 aaKnown RBP5.49□□□□□ -1.53
SYCP1-209ENST00000613524 TLR1Q15399 786 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 TCTN1Q2MV58 587 aa5.49□□□□□ -1.53
SYCP1-209ENST00000613524 C16orf59Q7L2K0 433 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms