RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 COILP38432 576 aaPredicted RBP15.6■□□□□ 0.09
VPS36-207ENST00000611132 PDIA2Q13087 525 aaKnown RBP15.6■□□□□ 0.09
VPS36-207ENST00000611132 PPP2R5DQ14738 602 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 RHOT1Q8IXI2 618 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 IQCKQ8N0W5 287 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 DTX3LQ8TDB6 740 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 UBXN6Q9BZV1 441 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 AIPL1Q9NZN9 384 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 SIK3Q9Y2K2 1263 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 L3MBTL1Q9Y468 752 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 O00370 1275 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 PON1P27169 355 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 DDR1Q08345 913 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 GJB7Q6PEY0 223 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 MAP7D3Q8IWC1 876 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 TATDN2Q93075 761 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 EIF2AK1Q9BQI3 630 aaKnown RBP15.6■□□□□ 0.09
VPS36-207ENST00000611132 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.6■□□□□ 0.09
VPS36-207ENST00000611132 DLGAP2Q9P1A6 1054 aa15.6■□□□□ 0.09
VPS36-207ENST00000611132 NWD1Q149M9 1564 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 GOLGA8MH3BSY2 632 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 SKAP2O75563 359 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 SNAP25P60880 206 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 DBN1Q16643 649 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 NXNQ6DKJ4 435 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 NLRP7Q8WX94 980 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 ABTB1Q969K4 478 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 PCDHGC5Q9Y5F6 944 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 PGM1P36871 562 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 PEX3P56589 373 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 WDR75Q8IWA0 830 aaKnown RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 HIPK4Q8NE63 616 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 OLFM3Q96PB7 478 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 C11orf70Q9BRQ4 267 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 A0A0A6YYK5 440 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 DOK7Q18PE1 504 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 RINT1Q6NUQ1 792 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 PCGF5Q86SE9 256 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 GPR101Q96P66 508 aaPredicted RBP15.59■□□□□ 0.09
VPS36-207ENST00000611132 CALN1Q9BXU9 219 aa15.59■□□□□ 0.09
VPS36-207ENST00000611132 ATXN2Q99700 1313 aaKnown RBP15.58■□□□□ 0.09
VPS36-207ENST00000611132 SLC26A4O43511 780 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 RASA1P20936 1047 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 PRELPP51888 382 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 ELF3P78545 371 aaPredicted RBP15.58■□□□□ 0.09
VPS36-207ENST00000611132 CUL3Q13618 768 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 PADI6Q6TGC4 694 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 ATP11CQ8NB49 1132 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 C18orf8Q96DM3 657 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 ZBTB10Q96DT7 871 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 NAF1Q96HR8 494 aaKnown RBP15.58■□□□□ 0.09
VPS36-207ENST00000611132 NPHS2Q9NP85 383 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 ZFATQ9P243 1243 aa15.58■□□□□ 0.09
VPS36-207ENST00000611132 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 CYP26A1O43174 497 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 GDF11O95390 407 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 KCNA3P22001 575 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 DARS2Q6PI48 645 aaKnown RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 MCF2L2Q86YR7 1114 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 C4orf33Q8N1A6 199 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 DCAF4Q8WV16 495 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 SUDS3Q9H7L9 328 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 ANKFY1Q9P2R3 1169 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 AGLP35573 1532 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 KDM6AO15550 1401 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 SLC37A4O43826 429 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 SMARCA1P28370 1054 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 RANBP1P43487 201 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 PTENP60484 403 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 GRAPQ13588 217 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 GEN1Q17RS7 908 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 SLC13A5Q86YT5 568 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 GRAPLQ8TC17 118 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 TEKT4Q8WW24 435 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 THAP2Q9H0W7 228 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 LRRIQ4A6NIV6 560 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 AGPSO00116 658 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 ARL1P40616 181 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 FNTAP49354 379 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 DNAJC3Q13217 504 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 PDE1CQ14123 709 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 LBHD1Q9BQE6 289 aaPredicted RBP15.58■□□□□ 0.08
VPS36-207ENST00000611132 SEMA4AQ9H3S1 761 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 UBN1Q9NPG3 1134 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 CCPG1Q9ULG6 757 aa15.58■□□□□ 0.08
VPS36-207ENST00000611132 PALM3A6NDB9 673 aaPredicted RBP15.57■□□□□ 0.08
VPS36-207ENST00000611132 ZBED4O75132 1171 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 TRPA1O75762 1119 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 ASPHQ12797 758 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 KRT39Q6A163 491 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
VPS36-207ENST00000611132 RFX8Q6ZV50 586 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 RGL1Q9NZL6 768 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 CACNA1FO60840 1977 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 KLRC4O43908 158 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 LPXNO60711 386 aa15.57■□□□□ 0.08
VPS36-207ENST00000611132 ITGA8P53708 1063 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms