RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 KIAA1586Q9HCI6 787 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 HSPBP1Q9NZL4 362 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 LIMA1Q9UHB6 759 aaKnown RBP20.31■□□□□ 0.84
SSBP4-212ENST00000601919 CDY2AQ9Y6F7 541 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 STYXL1Q9Y6J8 313 aa20.31■□□□□ 0.84
SSBP4-212ENST00000601919 ANKRD63C9JTQ0 380 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 MAPK13O15264 365 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 CLDN3O15551 220 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 LDHAP00338 332 aaKnown RBP20.3■□□□□ 0.84
SSBP4-212ENST00000601919 ATP1A3P13637 1013 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 AXLP30530 894 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 FANCCQ00597 558 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 SNX17Q15036 470 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 CATSPER4Q7RTX7 472 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 FRMD5Q7Z6J6 570 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 IRF2BP1Q8IU81 584 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 CAGE1Q8TC20 777 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 CBWD1Q9BRT8 395 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 TCHPQ9BT92 498 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 TRPV6Q9H1D0 765 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 IKZF4Q9H2S9 585 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 TNFSF13BQ9Y275 285 aa20.3■□□□□ 0.84
SSBP4-212ENST00000601919 LRRC10BA6NIK2 292 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 MNX1P50219 401 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-212ENST00000601919 MARSP56192 900 aaKnown RBP20.29■□□□□ 0.84
SSBP4-212ENST00000601919 UBASH3AP57075 661 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 PPP2R3AQ06190 1150 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 BFSP2Q13515 415 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 C1orf53Q5VUE5 145 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 SLC39A4Q6P5W5 647 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 MPZL3Q6UWV2 235 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 SLC39A5Q6ZMH5 540 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 FAM126BQ8IXS8 530 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 FAM186BQ8IYM0 893 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 PCIF1Q9H4Z3 704 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 C11orf49Q9H6J7 331 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 ANKFY1Q9P2R3 1169 aa20.29■□□□□ 0.84
SSBP4-212ENST00000601919 ARMCX3Q9UH62 379 aaPredicted RBP20.29■□□□□ 0.84
SSBP4-212ENST00000601919 A0A0B4J269 797 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 DCDC2CA8MYV0 355 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 N4BP3O15049 544 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 COL6A1P12109 1028 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 ADSSP30520 456 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 KRT31Q15323 416 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 AMHR2Q16671 573 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 KYAT1Q16773 422 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 FAM26DQ5JW98 314 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 ANKRD33Q7Z3H0 272 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 USP37Q86T82 979 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 GPD1LQ8N335 351 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 USP38Q8NB14 1042 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 TOX2Q96NM4 488 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 ADPGKQ9BRR6 497 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 TUBGCP2Q9BSJ2 902 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 MSTO1Q9BUK6 570 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 CDHR5Q9HBB8 845 aa20.28■□□□□ 0.84
SSBP4-212ENST00000601919 AGO2Q9UKV8 859 aaKnown RBP20.28■□□□□ 0.84
SSBP4-212ENST00000601919 TISP43B9A030 160 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 EXTL3O43909 919 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 TSPAN1O60635 241 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 AKAP3O75969 853 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 CD4P01730 458 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 CHRNA1P02708 482 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 CTSHP09668 335 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 IQCF3P0C7M6 154 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 KRT13P13646 458 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 MCL1Q07820 350 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 MGAT3Q09327 533 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 NOLC1Q14978 699 aaKnown RBP eCLIP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 MAN2A1Q16706 1144 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 TRIM71Q2Q1W2 868 aaKnown RBP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 ZNF568Q3ZCX4 644 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 NOTUMQ6P988 496 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 INTS8Q75QN2 995 aaKnown RBP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 NECAB2Q7Z6G3 386 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 DHX38Q92620 1227 aaKnown RBP20.27■□□□□ 0.84
SSBP4-212ENST00000601919 WNT8BQ93098 351 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 IFNKQ9P0W0 207 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 SQORQ9Y6N5 450 aa20.27■□□□□ 0.84
SSBP4-212ENST00000601919 GPR182O15218 404 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 B4GALT5O43286 388 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 PQBP1O60828 265 aaKnown RBP20.26■□□□□ 0.83
SSBP4-212ENST00000601919 RPS6KA5O75582 802 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 EDN1P05305 212 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 CKBP12277 381 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 ARF4P18085 180 aaPredicted RBP20.26■□□□□ 0.83
SSBP4-212ENST00000601919 PROZP22891 400 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
SSBP4-212ENST00000601919 RBL2Q08999 1139 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 CCDC51Q96ER9 411 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 FBXL18Q96ME1 805 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 NOC4LQ9BVI4 516 aaKnown RBP20.26■□□□□ 0.83
SSBP4-212ENST00000601919 PTPRHQ9HD43 1115 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 AGPAT5Q9NUQ2 364 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.26■□□□□ 0.83
SSBP4-212ENST00000601919 CENPFP49454 3210 aa20.26■□□□□ 0.83
SSBP4-212ENST00000601919 A0A1B0GUA9 196 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms