RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 URGCPQ8TCY9 931 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 LRRC15Q8TF66 581 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 AK8Q96MA6 479 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 NT5C3AQ9H0P0 336 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 MIOSQ9NXC5 875 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 CLIC4Q9Y696 253 aa24.66■■□□□ 1.54
GTF2F1-204ENST00000594965 PRKCBP05771 671 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 KRT17Q04695 432 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 PLPP4Q5VZY2 271 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 PDE12Q6L8Q7 609 aaKnown RBP24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 RBM23Q86U06 439 aaKnown RBP24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 KCTD17Q8N5Z5 321 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 SYT2Q8N9I0 419 aaPredicted RBP24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 BCL7CQ8WUZ0 217 aaPredicted RBP24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 IFT74Q96LB3 600 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 GAD1Q99259 594 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 PDZD7Q9H5P4 517 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 UBN1Q9NPG3 1134 aa24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 PUF60Q9UHX1 559 aaKnown RBP24.65■■□□□ 1.54
GTF2F1-204ENST00000594965 ACKR2O00590 384 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 POMCP01189 267 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 IL9P15248 144 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 MLH1P40692 756 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 SLC11A1P49279 550 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 SLC12A3P55017 1021 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 RNASELQ05823 741 aaKnown RBP24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 MAPK6Q16659 721 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 EFHBQ8N7U6 833 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 GSTCDQ8NEC7 633 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 PPP2R3CQ969Q6 453 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 IGSF21Q96ID5 467 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 TCF25Q9BQ70 676 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 APOL6Q9BWW8 343 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 TRIM6Q9C030 488 aaPredicted RBP24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 GBP3Q9H0R5 595 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 TLE6Q9H808 572 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 KANSL3Q9P2N6 904 aa24.64■■□□□ 1.54
GTF2F1-204ENST00000594965 CUL9Q8IWT3 2517 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 GRXCR2A6NFK2 248 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 ARL5CA6NH57 179 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 HIDE1A8MVS5 230 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 PER2O15055 1255 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 GLP2RO95838 553 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 AKAP5P24588 427 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 NPTX2P47972 431 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 PRPF4BQ13523 1007 aaKnown RBP24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 DUSP6Q16828 381 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 NT5DC1Q5TFE4 455 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 PTCRAQ6ISU1 281 aaPredicted RBP24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 ZFP42Q96MM3 310 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 ENTPD7Q9NQZ7 604 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 GIT1Q9Y2X7 761 aa24.63■■□□□ 1.53
GTF2F1-204ENST00000594965 TNFRSF10AO00220 468 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 N4BP3O15049 544 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 SLC26A4O43511 780 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 STX6O43752 255 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 PLA2G4BP0C869 781 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 LIG1P18858 919 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 GUCY2CP25092 1073 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 LONP1P36776 959 aaKnown RBP24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 PEX3P56589 373 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 EEF1DP3Q658K8 133 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 VN1R2Q8NFZ6 395 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 TMEM169Q96HH4 297 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 CDK5RAP3Q96JB5 506 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 TMEM175Q9BSA9 504 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 VN1R3Q9BXE9 311 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 NGRNQ9NPE2 291 aaKnown RBP24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 CLEC1BQ9P126 229 aa24.62■■□□□ 1.53
GTF2F1-204ENST00000594965 SFI1A8K8P3 1242 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 UBA7P41226 1012 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 SCNN1GP51170 649 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 EFNA5P52803 228 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 RBM10P98175 930 aaKnown RBP24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 DSC1Q08554 894 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 TAS1R3Q7RTX0 852 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 TMC7Q7Z402 723 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 DDX53Q86TM3 631 aaKnown RBP24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 COLGALT2Q8IYK4 626 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 MSLNLQ96KJ4 702 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 DRC1Q96MC2 740 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 TIPINQ9BVW5 301 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 BLOC1S4Q9NUP1 217 aa24.61■■□□□ 1.53
GTF2F1-204ENST00000594965 CARNS1A5YM72 827 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 CCDC169A6NNP5 214 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 SSBP05455 408 aaKnown RBP eCLIP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 MARCKSP29966 332 aaPredicted RBP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 RAD51AP2Q09MP3 1159 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 KCNC3Q14003 757 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 CLUL1Q15846 466 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 PUS10Q3MIT2 529 aaKnown RBP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 ARSHQ5FYA8 562 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 FAM193BQ96PV7 902 aaPredicted RBP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 CDCA3Q99618 268 aaPredicted RBP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 ZBP1Q9H171 429 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 TMEM134Q9H6X4 195 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 KLK14Q9P0G3 267 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 ARHGAP28Q9P2N2 729 aa24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 FBXO2Q9UK22 296 aaPredicted RBP24.6■■□□□ 1.53
GTF2F1-204ENST00000594965 TTC28Q96AY4 2481 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms