RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 CCDC195A0A1B0GUA6 201 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 NT5C1B-RDH14C9J2C7 533 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 NCAM2O15394 837 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 GAS2O43903 313 aaKnown RBP9.78□□□□□ -0.84
SMAD4-215ENST00000592911 LILRB5O75023 590 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 NR1I2O75469 434 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 EFEMP2O95967 443 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 CFHP08603 1231 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 LAMP2P13473 410 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 HOXA9P31269 272 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 SLC11A1P49279 550 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 USP11P51784 963 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 FOSBP53539 338 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 PRKCEQ02156 737 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 FUT2Q10981 343 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 HTR4Q13639 388 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-215ENST00000592911 XKR3Q5GH77 459 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 B4GALNT3Q6L9W6 998 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 TYW1BQ6NUM6 668 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 APOA5Q6Q788 366 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
SMAD4-215ENST00000592911 ZBTB44Q8NCP5 570 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 PHKBQ93100 1093 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 CCDC51Q96ER9 411 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 VN1R3Q9BXE9 311 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 C22orf23Q9BZE7 217 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 DISC1Q9NRI5 854 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 AGPAT5Q9NUQ2 364 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 ZSCAN32Q9NX65 697 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
SMAD4-215ENST00000592911 PCDHGA10Q9Y5H3 936 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 RBM8AQ9Y5S9 174 aaKnown RBP9.78□□□□□ -0.84
SMAD4-215ENST00000592911 R4GN57 208 aa9.78□□□□□ -0.84
SMAD4-215ENST00000592911 USP24Q9UPU5 2620 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 SPAG17Q6Q759 2223 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 KANSL1LA0AUZ9 987 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 LAMTOR5O43504 91 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 NARSO43776 548 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 ZNF862O60290 1169 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 N4BP1O75113 896 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 AXLP30530 894 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 RPS9P46781 194 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 GLUD2P49448 558 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 DSG1Q02413 1049 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 RTN1Q16799 776 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 RNF20Q5VTR2 975 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 SRGAP1Q7Z6B7 1085 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 MICU3Q86XE3 530 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 LRRC71Q8N4P6 559 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 GPR152Q8TDT2 470 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 ATRIPQ8WXE1 791 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 AUTS2Q8WXX7 1259 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 DDX1Q92499 740 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 SMG7Q92540 1137 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 PPP1R16BQ96T49 567 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 PRKD2Q9BZL6 878 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 NT5C3AQ9H0P0 336 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 RSAD1Q9HA92 442 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 C6orf50Q9HD87 102 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 NCDNQ9UBB6 729 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
SMAD4-215ENST00000592911 SAMM50Q9Y512 469 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 PCDHB2Q9Y5E7 798 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 ATRXP46100 2492 aa9.77□□□□□ -0.85
SMAD4-215ENST00000592911 FAM205CA6NFA0 338 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 TEX28O15482 410 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ASAP2O43150 1006 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ZBTB43O43298 467 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 MAFO75444 373 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ADRB1P08588 477 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 HNRNPA1P09651 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 GSPT1P15170 499 aaKnown RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 NCLP19338 710 aaKnown RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ATXN1P54253 815 aaKnown RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 NRLP54845 237 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 DSC1Q08554 894 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 PPP2R5DQ14738 602 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 PFKFB3Q16875 520 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CATSPER4Q7RTX7 472 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 MAML2Q8IZL2 1156 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ZNF454Q8N9F8 522 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CCDC148Q8NFR7 591 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 EXOC6Q8TAG9 804 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 BCL7CQ8WUZ0 217 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CLDN23Q96B33 292 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 ZNF707Q96C28 371 aaPredicted RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 MBOAT7Q96N66 472 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 MYADMQ96S97 322 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CEP89Q96ST8 783 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CHST7Q9NS84 486 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 CA14Q9ULX7 337 aa9.76□□□□□ -0.85
SMAD4-215ENST00000592911 MRPS17Q9Y2R5 130 aaKnown RBP9.76□□□□□ -0.85
SMAD4-215ENST00000592911 TAF6LQ9Y6J9 622 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms