RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 KIFC3Q9BVG8 833 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 CFAP69A5D8W1 941 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 SGK1O00141 431 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 EML1O00423 815 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 TMEM253P0C7T8 217 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
RNF43-207ENST00000583753 TMEM119Q4V9L6 283 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 ERMARDQ5T6L9 678 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 CD302Q8IX05 232 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 PPFIBP2Q8ND30 876 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 LRRC37BQ96QE4 947 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 RAB3IPQ96QF0 476 aaPredicted RBP11.32□□□□□ -0.6
RNF43-207ENST00000583753 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
RNF43-207ENST00000583753 LRRD1A4D1F6 860 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 TMEM150BA6NC51 233 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 BMP3P12645 472 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 ALAS1P13196 640 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 VAMP7P51809 220 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
RNF43-207ENST00000583753 EPHA7Q15375 998 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 MIGA2Q7L4E1 593 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
RNF43-207ENST00000583753 NARFQ9UHQ1 456 aa11.32□□□□□ -0.6
RNF43-207ENST00000583753 NWD2Q9ULI1 1742 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 MSH4O15457 936 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PPP1R11O60927 126 aaPredicted RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 POLR2MP0CAP2 368 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 CD19P15391 556 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 COILP38432 576 aaPredicted RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 CPA2P48052 419 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PTENP60484 403 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 STRN3Q13033 797 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 SYDE2Q5VT97 1194 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 NT5C1BQ96P26 610 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 GLT8D2Q9H1C3 349 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 CARD9Q9H257 536 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 EHMT1Q9H9B1 1298 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 NPHS2Q9NP85 383 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 SLC12A6Q9UHW9 1150 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 ARL2BPQ9Y2Y0 163 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 ABCB11O95342 1321 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 LGR5O75473 907 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 GAP43P17677 238 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 RASSF2P50749 326 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 COPS2P61201 443 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 DLG4P78352 724 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 SEMA3FQ13275 785 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 BBS9Q3SYG4 887 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 IZUMO3Q5VZ72 239 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 AP1ARQ63HQ0 302 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 LLGL2Q6P1M3 1020 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PPP1R21Q6ZMI0 780 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 APBB1IPQ7Z5R6 666 aaPredicted RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 CFAP61Q8NHU2 1237 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 RILPQ96NA2 401 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 TMEM117Q9H0C3 514 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 MYO5AQ9Y4I1 1855 aaKnown RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 TNS2Q63HR2 1409 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 ANKRD63C9JTQ0 380 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 HNRNPDLO14979 420 aaKnown RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 RASSF9O75901 435 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 LCA5LO95447 670 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 SERPINB2P05120 415 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 FGRP09769 529 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 RARAP10276 462 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 CHRM1P11229 460 aaPredicted RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 MFAP3P55082 362 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PLCB4Q15147 1175 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 SLC47A2Q86VL8 602 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PALM2Q8IXS6 379 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 PDCD7Q8N8D1 485 aaKnown RBP11.31□□□□□ -0.6
RNF43-207ENST00000583753 TTC17Q96AE7 1141 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 NACC1Q96RE7 527 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 LXNQ9BS40 222 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 KCTD10Q9H3F6 313 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 KDM4CQ9H3R0 1056 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 GPRC5CQ9NQ84 441 aa11.31□□□□□ -0.6
RNF43-207ENST00000583753 COL5A2P05997 1499 aaPredicted RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 MIF4GDA9UHW6 222 aaKnown RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 M0R2N6 131 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 KRT16P08779 473 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 RPA1P27694 616 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 BFSP1Q12934 665 aa11.3□□□□□ -0.6
RNF43-207ENST00000583753 SLC13A5Q86YT5 568 aaPredicted RBP11.3□□□□□ -0.6
RNF43-207ENST00000583753 SYT2Q8N9I0 419 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms