RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 KCNT2Q6UVM3 1135 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 ZBTB8OSQ8IWT0 167 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 MICAL1Q8TDZ2 1067 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 PABPC5Q96DU9 382 aaKnown RBP10.05□□□□□ -0.8
NDE1-207ENST00000573203 CPB2Q96IY4 423 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 UHRF1Q96T88 793 aaPredicted RBP10.05□□□□□ -0.8
NDE1-207ENST00000573203 NFKBIZQ9BYH8 718 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 IGFLR1Q9H665 355 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 TLR9Q9NR96 1032 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 CLDND1Q9NY35 253 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
NDE1-207ENST00000573203 INPP5FQ9Y2H2 1132 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 PCDHB2Q9Y5E7 798 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 PCDHGA10Q9Y5H3 936 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 VCANP13611 3396 aa10.05□□□□□ -0.8
NDE1-207ENST00000573203 MEIS3P2A8K0S8 358 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 TSPAN1O60635 241 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 OFD1O75665 1012 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 CDC25AP30304 524 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 IRS1P35568 1242 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 PBX3P40426 434 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 ALDH7A1P49419 539 aaKnown RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 KRT17Q04695 432 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 RNASELQ05823 741 aaKnown RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 MBTD1Q05BQ5 628 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 HYAL1Q12794 435 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 PKP1Q13835 747 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 ZRSR1Q15695 479 aaKnown RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 IL17AQ16552 155 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 KLHL40Q2TBA0 621 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 NOMO2Q5JPE7 1267 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 UBXN11Q5T124 520 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 MRPL10Q7Z7H8 261 aaKnown RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 CNNM3Q8NE01 707 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 URGCPQ8TCY9 931 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 MRPS27Q92552 414 aaKnown RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 CCDC51Q96ER9 411 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 TRIM6Q9C030 488 aaPredicted RBP10.04□□□□□ -0.8
NDE1-207ENST00000573203 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 SPG21Q9NZD8 308 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 DNM3Q9UQ16 869 aa10.04□□□□□ -0.8
NDE1-207ENST00000573203 VWA3AA6NCI4 1184 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 E9PMD0 336 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 H3BQ06 376 aaPredicted RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 ZC3H11AO75152 810 aaKnown RBP eCLIP10.03□□□□□ -0.8
NDE1-207ENST00000573203 EYA4O95677 639 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 ITGA4P13612 1032 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 ARF4P18085 180 aaPredicted RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 NCLP19338 710 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 GTF2F1P35269 517 aaKnown RBP eCLIP10.03□□□□□ -0.8
NDE1-207ENST00000573203 NAMPTP43490 491 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 BCAR1P56945 870 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 PLCB3Q01970 1234 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 PPP2R5AQ15172 486 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 AMHR2Q16671 573 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 LEXMQ3ZCV2 418 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 ARL6IP4Q66PJ3 421 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 CDCA2Q69YH5 1023 aaPredicted RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 PDE12Q6L8Q7 609 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 ADGRD1Q6QNK2 874 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 AGMOQ6ZNB7 445 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 ADGRD2Q7Z7M1 963 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 RBM23Q86U06 439 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 TMEM87AQ8NBN3 555 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 IFT74Q96LB3 600 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 MMTAG2Q9BU76 263 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 EIF2AQ9BY44 585 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 GBP3Q9H0R5 595 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 CSRNP2Q9H175 543 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 C2orf40Q9H1Z8 148 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 UBN1Q9NPG3 1134 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 ENTPD7Q9NQZ7 604 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 LMBRD1Q9NUN5 540 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 TBC1D13Q9NVG8 400 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 PRMT7Q9NVM4 692 aaPredicted RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 LZTS1Q9Y250 596 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 PCDHGC5Q9Y5F6 944 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 TDRD15B5MCY1 1934 aaKnown RBP10.03□□□□□ -0.8
NDE1-207ENST00000573203 CNTNAP2Q9UHC6 1331 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 MYH11P35749 1972 aa10.03□□□□□ -0.8
NDE1-207ENST00000573203 SPTBN5Q9NRC6 3674 aaKnown RBP10.02□□□□□ -0.8
NDE1-207ENST00000573203 CARNS1A5YM72 827 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NT5C1B-RDH14C9J2C7 533 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 B4GALT5O43286 388 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 BMP15O95972 392 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 PRKCBP05771 671 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 LIG1P18858 919 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NRIP1P48552 1158 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 NDUFV1P49821 464 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 ERVFC1P60507 584 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 COL19A1Q14993 1142 aa10.02□□□□□ -0.81
NDE1-207ENST00000573203 TMEM132AQ24JP5 1023 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms