RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 LRMDAQ9H2I8 198 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ALG2Q9H553 416 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 NLRC4Q9NPP4 1024 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 BLOC1S4Q9NUP1 217 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ARL2BPQ9Y2Y0 163 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 UTP11Q9Y3A2 253 aaKnown RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ZNF541Q9H0D2 1346 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 POTEFA5A3E0 1075 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 DDTLA6NHG4 134 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 MINDY4BA8MYZ0 360 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 KRIT1O00522 736 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 DDX3YO15523 660 aaKnown RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 CEP104O60308 925 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 UNC5CO95185 931 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 EYA4O95677 639 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 POTEJP0CG39 1038 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 TPBGLP0DKB5 382 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ATP11AP98196 1134 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 MGAT5Q09328 741 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 RRP1BQ14684 758 aaKnown RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 CGB2Q6NT52 195 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 POTEEQ6S8J3 1075 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 NPAS4Q8IUM7 802 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 KIAA0825Q8IV33 1275 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ASAP3Q8TDY4 903 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 EZH1Q92800 747 aaPredicted RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 AZIN2Q96A70 460 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 KLHL29Q96CT2 875 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 CEP63Q96MT8 703 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 GORASP1Q9BQQ3 440 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ERP44Q9BS26 406 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 ZMYND12Q9H0C1 365 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 AZI2Q9H6S1 392 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 CYP39A1Q9NYL5 469 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 GRHL1Q9NZI5 618 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 MAD2L2Q9UI95 211 aa5.87□□□□□ -1.47
LINC01541-202ENST00000568095 BZW2Q9Y6E2 419 aaKnown RBP5.87□□□□□ -1.47
LINC01541-202ENST00000568095 TRAFD1O14545 582 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 KIAA0391O15091 583 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SUN1O94901 812 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ALAS1P13196 640 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 RPS12P25398 132 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 KIF5BP33176 963 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 PTGIRP43119 386 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 PEX5P50542 639 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ASIC1P78348 528 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 LACTBP83111 547 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 VAC14Q08AM6 782 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 AUHQ13825 339 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 DHX34Q14147 1143 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 CCDC178Q5BJE1 867 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 NOP9Q86U38 636 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SESTD1Q86VW0 696 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TRIM59Q8IWR1 403 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TMC2Q8TDI7 906 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 STK32AQ8WU08 396 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TEKT4Q8WW24 435 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 CKAP2Q8WWK9 683 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 NCSTNQ92542 709 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TEPSINQ96N21 525 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 EPAS1Q99814 870 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ROPN1BQ9BZX4 212 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TLE6Q9H808 572 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ROPN1Q9HAT0 212 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 USP40Q9NVE5 1235 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SAP30BPQ9UHR5 308 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 PNMA3Q9UL41 463 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ATP8A1Q9Y2Q0 1164 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SMCHD1A6NHR9 2005 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 LRRC37A2A6NM11 1700 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 LRRD1A4D1F6 860 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 MYMKA6NI61 221 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 COQ9O75208 318 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ATP5HO75947 161 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 YBX3P16989 372 aaKnown RBP eCLIP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 SP100P23497 879 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 GBP1P32455 592 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 JAG1P78504 1218 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 GRM4Q14833 912 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TUSC1Q2TAM9 212 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 TDRD12Q587J7 1177 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 FAM47AQ5JRC9 791 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 DCAF12L1Q5VU92 463 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 ZNF571Q7Z3V5 609 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 EXOC3L1Q86VI1 746 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 LARGE2Q8N3Y3 721 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 HPS3Q969F9 1004 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 RAB3IPQ96QF0 476 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 UCN2Q96RP3 112 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 CELF4Q9BZC1 486 aaKnown RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 STMN4Q9H169 189 aaPredicted RBP5.86□□□□□ -1.47
LINC01541-202ENST00000568095 STK17AQ9UEE5 414 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 NAGPAQ9UK23 515 aa5.86□□□□□ -1.47
LINC01541-202ENST00000568095 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms