RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 WASF1Q92558 559 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 CPB2Q96IY4 423 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 TRIM6Q9C030 488 aaPredicted RBP14.47□□□□□ -0.09
SF3B3-202ENST00000562722 IPPQ9Y573 584 aa14.47□□□□□ -0.09
SF3B3-202ENST00000562722 ZBTB39O15060 712 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 TSPAN1O60635 241 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 PFKFB2O60825 505 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 NR1I2O75469 434 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 SOD2P04179 222 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 ADH1AP07327 375 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 MYBP10242 640 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 KRT2P35908 639 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 MXD4Q14582 209 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-202ENST00000562722 ASTLQ6HA08 431 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-202ENST00000562722 HACE1Q8IYU2 909 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 TMEM105Q8N8V8 129 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 SMG8Q8ND04 991 aaKnown RBP14.46□□□□□ -0.09
SF3B3-202ENST00000562722 FEZF2Q8TBJ5 459 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 GAD1Q99259 594 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 HERC2P3Q9BVR0 1158 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 EIF2AQ9BY44 585 aaKnown RBP14.46□□□□□ -0.09
SF3B3-202ENST00000562722 MAN1C1Q9NR34 630 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 ORC3Q9UBD5 711 aaPredicted RBP14.46□□□□□ -0.09
SF3B3-202ENST00000562722 FBXL21Q9UKT6 434 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 TPCN1Q9ULQ1 816 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 SSX2IPQ9Y2D8 614 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 HES2Q9Y543 173 aa14.46□□□□□ -0.09
SF3B3-202ENST00000562722 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 ARL5CA6NH57 179 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 AXLP30530 894 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 GLUD2P49448 558 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 SCNN1GP51170 649 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 NR5A1Q13285 461 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 PCBP1Q15365 356 aaKnown RBP eCLIP14.45□□□□□ -0.1
SF3B3-202ENST00000562722 CALCRLQ16602 461 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 EARS2Q5JPH6 523 aaKnown RBP14.45□□□□□ -0.1
SF3B3-202ENST00000562722 CCDC51Q96ER9 411 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 RPS6KC1Q96S38 1066 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 EIF2AK1Q9BQI3 630 aaKnown RBP14.45□□□□□ -0.1
SF3B3-202ENST00000562722 DPP7Q9UHL4 492 aa14.45□□□□□ -0.1
SF3B3-202ENST00000562722 SLITRK3O94933 977 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 GLUD1P00367 558 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 GBP2P32456 591 aaPredicted RBP14.44□□□□□ -0.1
SF3B3-202ENST00000562722 FOSBP53539 338 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 PTENP60484 403 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 SPIRE1Q08AE8 756 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 TDGQ13569 410 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 ANKRD1Q15327 319 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 C15orf39Q6ZRI6 1047 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 TAS1R1Q7RTX1 841 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 COLGALT2Q8IYK4 626 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 ZFP42Q96MM3 310 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 COLEC11Q9BWP8 271 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 CSRNP2Q9H175 543 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 RNF39Q9H2S5 420 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 XPNPEP1Q9NQW7 623 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 MARCH5Q9NX47 278 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 PCDHA12Q9UN75 941 aa14.44□□□□□ -0.1
SF3B3-202ENST00000562722 CCDC195A0A1B0GUA6 201 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 TEX28O15482 410 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 LILRB3O75022 631 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 DGAT1O75907 488 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 RFX1P22670 979 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 MBTD1Q05BQ5 628 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 CAPSQ13938 189 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 ASAP3Q8TDY4 903 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 STAMQ92783 540 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 POLR3FQ9H1D9 316 aaPredicted RBP14.43□□□□□ -0.1
SF3B3-202ENST00000562722 NXF3Q9H4D5 531 aaKnown RBP14.43□□□□□ -0.1
SF3B3-202ENST00000562722 KCNK12Q9HB15 430 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 PIDD1Q9HB75 910 aa14.43□□□□□ -0.1
SF3B3-202ENST00000562722 STK25O00506 426 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 INPPL1O15357 1258 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 NEMFO60524 1076 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 CTDNEP1O95476 244 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 NPTXRO95502 500 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 SPATA31D3P0C874 917 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 ARF4P18085 180 aaPredicted RBP14.42□□□□□ -0.1
SF3B3-202ENST00000562722 AKAP5P24588 427 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 TXKP42681 527 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 CLCN5P51795 746 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 TRIM29Q14134 588 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 TMEM132AQ24JP5 1023 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 SPATA31D4Q6ZUB0 917 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 MAEAQ7L5Y9 396 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 CDR2LQ86X02 465 aaPredicted RBP14.42□□□□□ -0.1
SF3B3-202ENST00000562722 PALB2Q86YC2 1186 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 GLYCTKQ8IVS8 523 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 NECAB1Q8N987 351 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 PIGOQ8TEQ8 1089 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 SMG7Q92540 1137 aaKnown RBP14.42□□□□□ -0.1
SF3B3-202ENST00000562722 B3GALT6Q96L58 329 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 TTC12Q9H892 705 aaPredicted RBP14.42□□□□□ -0.1
SF3B3-202ENST00000562722 ANKEF1Q9NU02 776 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 PARP2Q9UGN5 583 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 GIT1Q9Y2X7 761 aa14.42□□□□□ -0.1
SF3B3-202ENST00000562722 CLUHO75153 1309 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 F8W810 466 aa14.41□□□□□ -0.1
SF3B3-202ENST00000562722 B4GALT5O43286 388 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms