RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ENC1O14682 589 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 BRINP1O60477 761 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 NOL3O60936 208 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CD4P01730 458 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SRGAP2BP0DMP2 458 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 HNRNPCL4P0DMR1 293 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CKBP12277 381 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZKSCAN1P17029 563 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 HDCP19113 662 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SDSP20132 328 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 FUT4P22083 530 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ATP5F1P24539 256 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CYP2C19P33261 490 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ABCG1P45844 678 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 MNAT1P51948 309 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C21orf58P58505 322 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 POLR2FP61218 127 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CAP1Q01518 475 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CDC16Q13042 620 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 TRIM14Q14142 442 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 STAT4Q14765 748 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 WDR43Q15061 677 aaKnown RBP eCLIP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 WSCD2Q2TBF2 565 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 NAA16Q6N069 864 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LLGL2Q6P1M3 1020 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LEKR1Q6ZMV7 388 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 EPM2AIP1Q7L775 607 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 BNIPLQ7Z465 357 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 GALNTL5Q7Z4T8 443 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LRRTM3Q86VH5 581 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SLITRK4Q8IW52 837 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCDC83Q8IWF9 413 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ANKRD53Q8N9V6 530 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 RNF214Q8ND24 703 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ST13P5Q8NFI4 369 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 OR52K1Q8NGK4 314 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 UTP15Q8TED0 518 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 NOC3LQ8WTT2 800 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 COG1Q8WTW3 980 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LEO1Q8WVC0 666 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 TCP11Q8WWU5 503 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 VPS39Q96JC1 886 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 FAM84AQ96KN4 292 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 RHOVQ96L33 236 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C16orf45Q96MC5 204 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 JAKMIP1Q96N16 626 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 NAA15Q9BXJ9 866 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C2orf40Q9H1Z8 148 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SLC12A5Q9H2X9 1139 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C8orf33Q9H7E9 229 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LIN7BQ9HAP6 207 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 ANLNQ9NQW6 1124 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LATS2Q9NRM7 1088 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C1GALT1Q9NS00 363 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 C1orf112Q9NSG2 853 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 RRN3Q9NYV6 651 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 TBC1D7Q9P0N9 293 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SUCLA2Q9P2R7 463 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 MOSPD1Q9UJG1 213 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 FOXD3Q9UJU5 478 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 CCPG1Q9ULG6 757 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 LRCH1Q9Y2L9 728 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 TMED5Q9Y3A6 229 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 JRKLQ9Y4A0 524 aa4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P26-201ENST00000560051 SMARCA2P51531 1590 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 CARMIL2Q6F5E8 1435 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 IQANK1A0A1B0GTG1 560 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZSCAN9O15535 394 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ADCY3O60266 1144 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 TSPAN1O60635 241 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 AOC2O75106 756 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 RTN2O75298 545 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 DDAH1O94760 285 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 IL33O95760 270 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 DNTTP04053 509 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 CYP1A2P05177 515 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 CD8BP10966 210 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 TOP1P11387 765 aaKnown RBP4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 PCP11498 1178 aaKnown RBP4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 LAG3P18627 525 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 MAP2K2P36507 400 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 MSH2P43246 934 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 SULT1E1P49888 294 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ALDH3A2P51648 485 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ALDH5A1P51649 535 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 CLCN2P51788 898 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 RPS6KA3P51812 740 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 DR1Q01658 176 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 PRKCQQ04759 706 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ITIH3Q06033 890 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 AP3B2Q13367 1082 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 DPYSQ14117 519 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 NEDD9Q14511 834 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 STK11Q15831 433 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 LONRF2Q1L5Z9 754 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 ZNF423Q2M1K9 1284 aa4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 SHROOM1Q2M3G4 852 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P26-201ENST00000560051 VWA3BQ502W6 1294 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms