RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MAP1BP46821 2468 aaKnown RBP15.7■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ADGRA3Q8IWK6 1321 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 FRMD3A2A2Y4 597 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 HAS3O00219 553 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 GLP2RO95838 553 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 P4HBP07237 508 aaKnown RBP15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ZNF286BP0CG31 522 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ARP10275 920 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 GAP43P17677 238 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 EEF1GP26641 437 aaKnown RBP15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PRCPP42785 496 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MRPS9P82933 396 aaKnown RBP15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 LRRC63Q05C16 580 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 HIC1Q14526 733 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ECM1Q16610 540 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CDKAL1Q5VV42 579 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KLHL10Q6JEL2 608 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ZNF746Q6NUN9 644 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MIER3Q7Z3K6 550 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SERINC5Q86VE9 423 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 GPBP1Q86WP2 473 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SMAP1Q8IYB5 467 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DNAJC19Q96DA6 116 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TIPINQ9BVW5 301 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 THAP9Q9H5L6 903 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 IFNKQ9P0W0 207 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SEL1LQ9UBV2 794 aa15.69■□□□□ 0.1
TRAPPC6B-206ENST00000556765 WDR64B1ANS9 1081 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KRT18P05783 430 aaKnown RBP15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TPM2P07951 284 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PRKCSHP14314 528 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CD44P16070 742 aaKnown RBP15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CYP11B2P19099 503 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 NRIP1P48552 1158 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PUM1Q14671 1186 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 STXBP2Q15833 593 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 POTEGQ6S5H5 508 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KCNK18Q7Z418 384 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CCDC150Q8NCX0 1101 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SUSD6Q92537 303 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 P2RX5Q93086 422 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TSG101Q99816 390 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PLVAPQ9BX97 442 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 OSBPL7Q9BZF2 842 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 XPO4Q9C0E2 1151 aaKnown RBP15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 UNC45AQ9H3U1 944 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ZSWIM4Q9H7M6 989 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PANK4Q9NVE7 773 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PLAGL2Q9UPG8 496 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PKD1L2Q7Z442 2459 aa15.68■□□□□ 0.1
TRAPPC6B-206ENST00000556765 WDR81Q562E7 1941 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 E9PMD0 336 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 EIF3JO75822 258 aaKnown RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SLITRK3O94933 977 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MYCLP12524 364 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 IDEP14735 1019 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DNAJB1P25685 340 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 FAM26FQ5R3K3 315 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ASTLQ6HA08 431 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SEPT14Q6ZU15 432 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 RBM23Q86U06 439 aaKnown RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KREMEN2Q8NCW0 462 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 IL31RAQ8NI17 732 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 GJA10Q969M2 543 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 RC3H2Q9HBD1 1191 aaKnown RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MAGEC2Q9UBF1 373 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DBR1Q9UK59 544 aaKnown RBP15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ODF2LQ9ULJ1 636 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 GDAQ9Y2T3 454 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 COL4A3BPQ9Y5P4 624 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 USP24Q9UPU5 2620 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 UBE4BO95155 1302 aa15.67■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MYH11P35749 1972 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 LRRC10BA6NIK2 292 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 EML1O00423 815 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DHX15O43143 795 aaKnown RBP15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TBCAO75347 108 aaKnown RBP15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 SSBP05455 408 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CTSHP09668 335 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 BTG3Q14201 252 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KCNV1Q6PIU1 500 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 STXBP4Q6ZWJ1 553 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 UBALD2Q8IYN6 164 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 KIAA2013Q8IYS2 634 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 APBB2Q92870 758 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DYDC2Q96IM9 177 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 OLFML3Q9NRN5 406 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 LIMA1Q9UHB6 759 aaKnown RBP15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 PCDHGC5Q9Y5F6 944 aa15.66■□□□□ 0.1
TRAPPC6B-206ENST00000556765 A0A1B0GTH6 734 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TGFB3P10600 412 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 ATP1A3P13637 1013 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 QARSP47897 775 aaKnown RBP15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 STK4Q13043 487 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 MTMR3Q13615 1198 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 TTI2Q6NXR4 508 aa15.65■□□□□ 0.1
TRAPPC6B-206ENST00000556765 DYMQ7RTS9 669 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms