RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 A8MUI8 341 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 DIAPH2O60879 1101 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 NMT1P30419 496 aaKnown RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 GCKP35557 465 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 DUPD1Q68J44 220 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 PPP4R3CPQ6ZMV5 832 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 FAM186BQ8IYM0 893 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 MYCT1Q8N699 235 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 AGAP11Q8TF27 550 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 KRT35Q92764 455 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 RGL1Q9NZL6 768 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 CCDC189A1A4V9 331 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 CREB1P16220 341 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 HOXD13P35453 343 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 RPL21P46778 160 aaKnown RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 COG2Q14746 738 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 MAEAQ7L5Y9 396 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 SLFN11Q7Z7L1 901 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 MICAL1Q8TDZ2 1067 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 ATXN2LQ8WWM7 1075 aaKnown RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 KLHL29Q96CT2 875 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 NAP1L3Q99457 506 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 PAIP2Q9BPZ3 127 aaKnown RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 NSRP1Q9H0G5 558 aaKnown RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 SIX2Q9NPC8 291 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 TBK1Q9UHD2 729 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 ALG6Q9Y672 507 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 ATMINO43313 823 aaPredicted RBP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 SOX5P35711 763 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 VPS41P49754 854 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 NT5C2P49902 561 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 SLC12A3P55017 1021 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 SATB1Q01826 763 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 UPF1Q92900 1129 aaKnown RBP eCLIP13.3□□□□□ -0.28
HDAC7-230ENST00000552960 ATP6V0A4Q9HBG4 840 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 KCNG1Q9UIX4 513 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 TRIM33Q9UPN9 1127 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
HDAC7-230ENST00000552960 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 IGF2BP3O00425 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ZNF76P36508 570 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 PRKCIP41743 596 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 MAPK7Q13164 816 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 SNX1Q13596 522 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 GPATCH4Q5T3I0 446 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 C6orf118Q5T5N4 469 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 CCDC137Q6PK04 289 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 KCNV2Q8TDN2 545 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 P3H4Q92791 437 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ADAM7Q9H2U9 754 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 EPB41L4BQ9H329 900 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ZDHHC18Q9NUE0 388 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ZBTB21Q9ULJ3 1066 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 KIAA0391O15091 583 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 DDX3YO15523 660 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 ZBTB48P10074 688 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 GHRP10912 638 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 LMNB1P20700 586 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 MMP13P45452 471 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 POU5F1Q01860 360 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 TRIP13Q15645 432 aaPredicted RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 AGBL3Q8NEM8 1001 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 POP1Q99575 1024 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 RUSC1Q9BVN2 902 aa13.29□□□□□ -0.28
HDAC7-230ENST00000552960 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
HDAC7-230ENST00000552960 FAM13AO94988 1023 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 UPP2O95045 317 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ERMNQ8TAM6 284 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 FAM167BQ9BTA0 163 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 COG5Q9UP83 839 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 TCRBV7S2A1N4TA0A589 114 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 PDXKO00764 312 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ZBTB39O15060 712 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ALDH5A1P51649 535 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 BIRC2Q13490 618 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 CTTNQ14247 550 aaKnown RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 DPY19L2P1Q6NXN4 242 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 CCDC174Q6PII3 467 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 SEPT14Q6ZU15 432 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ZBED3Q96IU2 234 aaPredicted RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 DDX23Q9BUQ8 820 aaKnown RBP13.28□□□□□ -0.28
HDAC7-230ENST00000552960 PNMA3Q9UL41 463 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 TRAF3IP3Q9Y228 551 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ASTN1O14525 1302 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 RPTORQ8N122 1335 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 ANKRD63C9JTQ0 380 aa13.28□□□□□ -0.28
HDAC7-230ENST00000552960 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 145.4 ms