RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 IPPQ9Y573 584 aa21.05■□□□□ 0.96
DDX55-211ENST00000544429 MRPL42Q9Y6G3 142 aaKnown RBP21.05■□□□□ 0.96
DDX55-211ENST00000544429 A0A1B0GVL5 298 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 H0YCG3 227 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 ABLIM1O14639 778 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 N4BP3O15049 544 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 ACTN4O43707 911 aaKnown RBP21.04■□□□□ 0.96
DDX55-211ENST00000544429 TRAK2O60296 914 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 TBCAO75347 108 aaKnown RBP21.04■□□□□ 0.96
DDX55-211ENST00000544429 KRT18P05783 430 aaKnown RBP21.04■□□□□ 0.96
DDX55-211ENST00000544429 PROZP22891 400 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 LRRC55Q6ZSA7 311 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 HAUS6Q7Z4H7 955 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 CDR2LQ86X02 465 aaPredicted RBP21.04■□□□□ 0.96
DDX55-211ENST00000544429 MYCT1Q8N699 235 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 LPPQ93052 612 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 ACO2Q99798 780 aaKnown RBP21.04■□□□□ 0.96
DDX55-211ENST00000544429 STRA6Q9BX79 667 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 TRIM9Q9C026 710 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 TNFSF13BQ9Y275 285 aa21.04■□□□□ 0.96
DDX55-211ENST00000544429 ZMYM2Q9UBW7 1377 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 TBKBP1A7MCY6 615 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 LPXNO60711 386 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 OFD1O75665 1012 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 PPP1R37O75864 691 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 SLFN14P0C7P3 912 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 GTF2BQ00403 316 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 ATF7IP2Q5U623 682 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 EEF1DP3Q658K8 133 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 STAMQ92783 540 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 PGBD4Q96DM1 585 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 C7orf25Q9BPX7 421 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 MRPL4Q9BYD3 311 aaKnown RBP21.03■□□□□ 0.96
DDX55-211ENST00000544429 LRRC27Q9C0I9 530 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 PRDM12Q9H4Q4 367 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 CWH43Q9H720 699 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 OLFML3Q9NRN5 406 aa21.03■□□□□ 0.96
DDX55-211ENST00000544429 GAP43P17677 238 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 POU3F3P20264 500 aaPredicted RBP21.02■□□□□ 0.96
DDX55-211ENST00000544429 IBSPP21815 317 aaPredicted RBP21.02■□□□□ 0.96
DDX55-211ENST00000544429 BMPR1AP36894 532 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 NDUFA8P51970 172 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 PAN2Q504Q3 1202 aaKnown RBP21.02■□□□□ 0.96
DDX55-211ENST00000544429 EPC2Q52LR7 807 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 ZPBP2Q6X784 338 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 SFR1Q86XK3 245 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 FAM178BQ8IXR5 827 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 TMEM192Q8IY95 271 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 SLC17A8Q8NDX2 589 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 HELQQ8TDG4 1101 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 GOLPH3LQ9H4A5 285 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 NXF3Q9H4D5 531 aaKnown RBP21.02■□□□□ 0.96
DDX55-211ENST00000544429 CERS4Q9HA82 394 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 USP25Q9UHP3 1055 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 RWDD3Q9Y3V2 267 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 HES2Q9Y543 173 aa21.02■□□□□ 0.96
DDX55-211ENST00000544429 ATG2AQ2TAZ0 1938 aa21.02■□□□□ 0.95
DDX55-211ENST00000544429 NPTXRO95502 500 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 PIGRP01833 764 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 NMT1P30419 496 aaKnown RBP21.01■□□□□ 0.95
DDX55-211ENST00000544429 ABCD1P33897 745 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 AMPD3Q01432 767 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 EHHADHQ08426 723 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 ADGRE1Q14246 886 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 LONRF3Q496Y0 759 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 ZNF720Q7Z2F6 126 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 RNF169Q8NCN4 708 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 ARNTL2Q8WYA1 636 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 MRPS27Q92552 414 aaKnown RBP21.01■□□□□ 0.95
DDX55-211ENST00000544429 TARS2Q9BW92 718 aaKnown RBP21.01■□□□□ 0.95
DDX55-211ENST00000544429 UBN1Q9NPG3 1134 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 TYW1Q9NV66 732 aaKnown RBP21.01■□□□□ 0.95
DDX55-211ENST00000544429 HCSTQ9UBK5 93 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 SERTAD1Q9UHV2 236 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 TBX20Q9UMR3 447 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 TDRD15B5MCY1 1934 aaKnown RBP21.01■□□□□ 0.95
DDX55-211ENST00000544429 TRIP11Q15643 1979 aa21.01■□□□□ 0.95
DDX55-211ENST00000544429 REV3LO60673 3130 aa21■□□□□ 0.95
DDX55-211ENST00000544429 K7ENM7 598 aa21■□□□□ 0.95
DDX55-211ENST00000544429 RB1P06400 928 aa21■□□□□ 0.95
DDX55-211ENST00000544429 LIG1P18858 919 aa21■□□□□ 0.95
DDX55-211ENST00000544429 AFF1P51825 1210 aaKnown RBP21■□□□□ 0.95
DDX55-211ENST00000544429 DCAF4L1Q3SXM0 396 aa21■□□□□ 0.95
DDX55-211ENST00000544429 GLB1LQ6UWU2 654 aa21■□□□□ 0.95
DDX55-211ENST00000544429 MAP4K3Q8IVH8 894 aa21■□□□□ 0.95
DDX55-211ENST00000544429 ABI1Q8IZP0 508 aa21■□□□□ 0.95
DDX55-211ENST00000544429 LRRC43Q8N309 656 aa21■□□□□ 0.95
DDX55-211ENST00000544429 FSIP1Q8NA03 581 aa21■□□□□ 0.95
DDX55-211ENST00000544429 PLVAPQ9BX97 442 aa21■□□□□ 0.95
DDX55-211ENST00000544429 MRPL9Q9BYD2 267 aaKnown RBP21■□□□□ 0.95
DDX55-211ENST00000544429 ZHX3Q9H4I2 956 aa21■□□□□ 0.95
DDX55-211ENST00000544429 RSAD1Q9HA92 442 aa21■□□□□ 0.95
DDX55-211ENST00000544429 PANK4Q9NVE7 773 aa21■□□□□ 0.95
DDX55-211ENST00000544429 PLXNA4Q9HCM2 1894 aa21■□□□□ 0.95
DDX55-211ENST00000544429 PRRC2BQ5JSZ5 2229 aaKnown RBP20.99■□□□□ 0.95
DDX55-211ENST00000544429 H3BNC9 293 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 RFXAPO00287 272 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 TOM1L1O75674 476 aa20.99■□□□□ 0.95
DDX55-211ENST00000544429 ITGA4P13612 1032 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms