RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 NDUFAB1O14561 156 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 KIF1CO43896 1103 aaKnown RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 PLA2G6O60733 806 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 TNNC1P63316 161 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 TNIP1Q15025 636 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 SCARA3Q6AZY7 606 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 SNRNP48Q6IEG0 339 aaKnown RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 CYFIP1Q7L576 1253 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 NOP9Q86U38 636 aaKnown RBP15.95■□□□□ 0.14
DDX55-209ENST00000542286 OTUD6BQ8N6M0 293 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 XXYLT1Q8NBI6 393 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 ACCSQ96QU6 501 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 AGPAT1Q99943 283 aa15.95■□□□□ 0.14
DDX55-209ENST00000542286 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.95■□□□□ 0.147e-8■■■□□ 15.9
DDX55-209ENST00000542286 DENND3A2RUS2 1198 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 RGS20O76081 388 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 NPTX2P47972 431 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 FNTAP49354 379 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 CFAP58Q5T655 872 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 FKBP1CQ5VVH2 108 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 MAATS1Q7Z4T9 603 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 SLFN11Q7Z7L1 901 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 ZNF526Q8TF50 670 aaPredicted RBP15.94■□□□□ 0.14
DDX55-209ENST00000542286 WRNIP1Q96S55 665 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 KIAA1683Q9H0B3 1180 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 CTTNBP2NLQ9P2B4 639 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 AMFRQ9UKV5 643 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 PFASO15067 1338 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 GOLGA8KD6RF30 607 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 KIAA0754O94854 1291 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 MMEP08473 750 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 MXI1P50539 228 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 PAK2Q13177 524 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 C10orf76Q5T2E6 689 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 DAB2IPQ5VWQ8 1189 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 SWSAP1Q6NVH7 229 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 SLC39A4Q6P5W5 647 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 RPAINQ86UA6 219 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 RFFLQ8WZ73 363 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 CAVIN3Q969G5 261 aa15.94■□□□□ 0.14
DDX55-209ENST00000542286 BTNL10A8MVZ5 291 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 DDX3YO15523 660 aaKnown RBP15.93■□□□□ 0.14
DDX55-209ENST00000542286 NNTQ13423 1086 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 MESDQ14696 234 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 PPP2R5AQ15172 486 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 SNRNP35Q16560 246 aaKnown RBP15.93■□□□□ 0.14
DDX55-209ENST00000542286 UBAP2Q5T6F2 1119 aaKnown RBP15.93■□□□□ 0.14
DDX55-209ENST00000542286 B4GALNT4Q76KP1 1039 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 MCF2L2Q86YR7 1114 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 MTMR14Q8NCE2 650 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 TAS1R2Q8TE23 839 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 TATDN2Q93075 761 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 HES6Q96HZ4 224 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 CEP170P1Q96L14 293 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 PLAAQ9Y263 795 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 BCRP11274 1271 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 LMNB1P20700 586 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 WNT7BP56706 349 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 MAP3K10Q02779 954 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 UAP1Q16222 522 aaPredicted RBP15.93■□□□□ 0.14
DDX55-209ENST00000542286 IQCKQ8N0W5 287 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 KCND2Q9NZV8 630 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
DDX55-209ENST00000542286 CNOT7Q9UIV1 285 aaKnown RBP15.93■□□□□ 0.14
DDX55-209ENST00000542286 TCRBV7S2A1N4TA0A589 114 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 NR3C2P08235 984 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 CHRNB2P17787 502 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 CNGA1P29973 690 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 PPATQ06203 517 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 GLE1Q53GS7 698 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 INTS8Q75QN2 995 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 TMEM161BQ8NDZ6 487 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 ACTRT1Q8TDG2 376 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 A1CFQ9NQ94 594 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 ZEB2O60315 1214 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 TMEM253P0C7T8 217 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 HPDP32754 393 aaPredicted RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 GUCY1A3Q02108 690 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 NFIL3Q16649 462 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 SEZ6Q53EL9 994 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 CEP85LQ5SZL2 805 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 CCDC60Q8IWA6 550 aaPredicted RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 ZDHHC14Q8IZN3 488 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 PBKQ96KB5 322 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 RNPC3Q96LT9 517 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 TAF1DQ9H5J8 278 aaPredicted RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 CD248Q9HCU0 757 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 SUCLA2Q9P2R7 463 aaPredicted RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 TBX20Q9UMR3 447 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 ALG6Q9Y672 507 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 MEFVO15553 781 aaPredicted RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 OPA1O60313 960 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 ZBED4O75132 1171 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 PSMC5P62195 406 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 GTF2BQ00403 316 aa15.92■□□□□ 0.14
DDX55-209ENST00000542286 IFI16Q16666 785 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
DDX55-209ENST00000542286 SLC9A9Q8IVB4 645 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms