RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 EPS15L1Q9UBC2 864 aa15.66■□□□□ 0.1
SMARCA4-206ENST00000538456 DDX25Q9UHL0 483 aaKnown RBP15.66■□□□□ 0.1
SMARCA4-206ENST00000538456 SNX14Q9Y5W7 946 aa15.66■□□□□ 0.1
SMARCA4-206ENST00000538456 DOCK6Q96HP0 2047 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 ARL5CA6NH57 179 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 ERLIN2O94905 339 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 DCNP07585 359 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 SRFP11831 508 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 ITGA4P13612 1032 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 NCLP19338 710 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 RPS6KB1P23443 525 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 PDIA3P30101 505 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 QARSP47897 775 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 GET4Q7L5D6 327 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 SRGAP1Q7Z6B7 1085 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 PALB2Q86YC2 1186 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 COLGALT2Q8IYK4 626 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 TRIM22Q8IYM9 498 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 BLIDQ8IZY5 108 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 RNF149Q8NC42 400 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 SMG8Q8ND04 991 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 GPR152Q8TDT2 470 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 ZNF707Q96C28 371 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 RMDN1Q96DB5 314 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 GAD1Q99259 594 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 HINFPQ9BQA5 517 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 APOL6Q9BWW8 343 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 EIF2AQ9BY44 585 aaKnown RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 DPP7Q9UHL4 492 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 SSX2IPQ9Y2D8 614 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 HES2Q9Y543 173 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 IPPQ9Y573 584 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 CEP250Q9BV73 2442 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 OTOGLQ3ZCN5 2332 aa15.65■□□□□ 0.1
SMARCA4-206ENST00000538456 MYH15Q9Y2K3 1946 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 SCNN1GP51170 649 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 EMC2Q15006 297 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 INF2Q27J81 1249 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 KIAA0319Q5VV43 1072 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 FANCMQ8IYD8 2048 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 KCNB2Q92953 911 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 ZFP42Q96MM3 310 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 MBOAT7Q96N66 472 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 DHX33Q9H6R0 707 aaKnown RBP15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 ARHGEF3Q9NR81 526 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 VAV3Q9UKW4 847 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 CACNA1IQ9P0X4 2223 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 MIA3Q5JRA6 1907 aa15.64■□□□□ 0.09
SMARCA4-206ENST00000538456 HSPA4P34932 840 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 RFC5P40937 340 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 DSG1Q02413 1049 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 DSC1Q08554 894 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 SSRP1Q08945 709 aaKnown RBP15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 PPP2R5CQ13362 524 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 MOXD1Q6UVY6 613 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 CYP26C1Q6V0L0 522 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 RNF168Q8IYW5 571 aaPredicted RBP15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 CPB2Q96IY4 423 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 AIFM3Q96NN9 605 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 LXNQ9BS40 222 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 AGXT2Q9BYV1 514 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 SEMA4AQ9H3S1 761 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 UBN1Q9NPG3 1134 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 SIT1Q9Y3P8 196 aa15.63■□□□□ 0.09
SMARCA4-206ENST00000538456 NCOR2Q9Y618 2525 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 MED19A0JLT2 244 aaPredicted RBP15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 M0R2N6 131 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 TGM5O43548 720 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 TSPAN1O60635 241 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 DKC1O60832 514 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 LAMP2P13473 410 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 RPL17P18621 184 aaKnown RBP15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 NPY5RQ15761 445 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 DGLUCYQ7Z3D6 616 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 FERMT3Q86UX7 667 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 FBXL16Q8N461 479 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 CNNM3Q8NE01 707 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 RABGGTAQ92696 567 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 RHOBTB2Q9BYZ6 727 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 NT5C3AQ9H0P0 336 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 MIOSQ9NXC5 875 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 NUMBLQ9Y6R0 609 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 COL4A3Q01955 1670 aa15.62■□□□□ 0.09
SMARCA4-206ENST00000538456 INO80B-WBP1J3KQ70 363 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 CPLX1O14810 134 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 GAS2O43903 313 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 NR1I2O75469 434 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 DEXIO95424 95 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 EFEMP2O95967 443 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 P4HBP07237 508 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 SP9P0CG40 484 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 YWHABP31946 246 aaKnown RBP15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 HTR4Q13639 388 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 XKR9Q5GH70 373 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 NOTUMQ6P988 496 aa15.61■□□□□ 0.09
SMARCA4-206ENST00000538456 DCLRE1AQ6PJP8 1040 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms