RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 NEK9Q8TD19 979 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 FAM118BQ9BPY3 351 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 EXOC7Q9UPT5 735 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 USTQ9Y2C2 406 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 SLC26A4O43511 780 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 PSAPP07602 524 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 VPS41P49754 854 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 IGBP1P78318 339 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 GNPTABQ3T906 1256 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 CEP85LQ5SZL2 805 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 CCDC25Q86WR0 208 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 MTMR14Q8NCE2 650 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 DEPTORQ8TB45 409 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 SLC16A10Q8TF71 515 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 INPP4AQ96PE3 977 aaPredicted RBP17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 MKNK1Q9BUB5 465 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 R3HDMLQ9H3Y0 253 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 ADGRA3Q8IWK6 1321 aa17.19■□□□□ 0.34
ATP2C1-224ENST00000533801 CSDE1O75534 798 aaKnown RBP17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 IRX3P78415 501 aaPredicted RBP17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 DPY19L2P1Q6NXN4 242 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 TLDC2A0PJX2 215 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 SP2Q02086 613 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 STRN3Q13033 797 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 SNX1Q13596 522 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 PPP2R5AQ15172 486 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 KRT35Q92764 455 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 NT5C1BQ96P26 610 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 SYNPO2Q9UMS6 1093 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 NOP9Q86U38 636 aaKnown RBP17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 TMEM161BQ8NDZ6 487 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 CPA5Q8WXQ8 436 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 RFFLQ8WZ73 363 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 ZBED3Q96IU2 234 aaPredicted RBP17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 ZIM3Q96PE6 472 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 TARS2Q9BW92 718 aaKnown RBP17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 CYP39A1Q9NYL5 469 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 KCND2Q9NZV8 630 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 COG5Q9UP83 839 aa17.18■□□□□ 0.34
ATP2C1-224ENST00000533801 RGS20O76081 388 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 HOXA7P31268 230 aaPredicted RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 DSG3P32926 999 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 CDR1P51861 262 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 C4orf19Q8IY42 314 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 LRRC71Q8N4P6 559 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 DMAC2Q9NW81 257 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 ZNF214Q9UL59 606 aaPredicted RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 CD58P19256 250 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 ERVK-9P63128 1117 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 MTFR1LQ9H019 292 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 GINS2Q9Y248 185 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 HIRAP54198 1017 aaPredicted RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 ZBTB41Q5SVQ8 909 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 AENQ8WTP8 325 aaKnown RBP17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 PPP1R13LQ8WUF5 828 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 MED4Q9NPJ6 270 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 CSADQ9Y600 493 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 ALG6Q9Y672 507 aa17.17■□□□□ 0.34
ATP2C1-224ENST00000533801 PLA2G6O60733 806 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 PRLRP16471 622 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SFNP31947 248 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 PDE6CP51160 858 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 KRT39Q6A163 491 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 FOXR2Q6PJQ5 311 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 B3GNT9Q6UX72 402 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SV2AQ7L0J3 742 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SYCE1Q8N0S2 351 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 CLMNQ96JQ2 1002 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 PCDHB18PQ96TA0 734 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.16■□□□□ 0.345e-8■■■■□ 20.2
ATP2C1-224ENST00000533801 GPR88Q9GZN0 384 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 ATP6V0A4Q9HBG4 840 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 CYP26B1Q9NR63 512 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 PRKCIP41743 596 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 PIK3CAP42336 1068 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 KCNJ1P48048 391 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 VGLL4Q14135 290 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 TRIP13Q15645 432 aaPredicted RBP17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SCARA5Q6ZMJ2 495 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 NT5DC3Q86UY8 548 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 KREMEN1Q96MU8 473 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 ATP8A1Q9Y2Q0 1164 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SNX24Q9Y343 169 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 RPTORQ8N122 1335 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 AGPSO00116 658 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 LY6KQ17RY6 165 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 SULF1Q8IWU6 871 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 NUP85Q9BW27 656 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 ZNF302Q9NR11 478 aa17.16■□□□□ 0.34
ATP2C1-224ENST00000533801 K7ERI5 159 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 PPP1R37O75864 691 aa17.15■□□□□ 0.34
ATP2C1-224ENST00000533801 GJB6O95452 261 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms