RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 CLP1Q92989 425 aaKnown RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 DNAJC19Q96DA6 116 aa14.71□□□□□ -0.05
VPS28-210ENST00000529182 FIZ1Q96SL8 496 aa14.71□□□□□ -0.05
VPS28-210ENST00000529182 NTPCRQ9BSD7 190 aaKnown RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 TARS2Q9BW92 718 aaKnown RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 TRIM6Q9C030 488 aaPredicted RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 TMEM134Q9H6X4 195 aa14.71□□□□□ -0.05
VPS28-210ENST00000529182 INPP5FQ9Y2H2 1132 aa14.71□□□□□ -0.05
VPS28-210ENST00000529182 RBM19Q9Y4C8 960 aaKnown RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 FNDC1Q4ZHG4 1894 aaPredicted RBP14.71□□□□□ -0.05
VPS28-210ENST00000529182 TCHHQ07283 1943 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 K7ENM7 598 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 N4BP3O15049 544 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 TRAK2O60296 914 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 OFD1O75665 1012 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 MAPTP10636 758 aaKnown RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 ITGA4P13612 1032 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 PFKFB1P16118 471 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 IGFBP4P22692 258 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 NMT1P30419 496 aaKnown RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 BMPR1AP36894 532 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 AFF1P51825 1210 aaKnown RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 SPOUT1Q5T280 376 aaKnown RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 ATF7IP2Q5U623 682 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 HAUS6Q7Z4H7 955 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 SFR1Q86XK3 245 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 PGBD4Q96DM1 585 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 SAMD11Q96NU1 681 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 GAS2L1Q99501 681 aaPredicted RBP14.7□□□□□ -0.06
VPS28-210ENST00000529182 CWH43Q9H720 699 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 RSAD1Q9HA92 442 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 KCNH3Q9ULD8 1083 aa14.7□□□□□ -0.06
VPS28-210ENST00000529182 MYH11P35749 1972 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 COL4A4P53420 1690 aaPredicted RBP14.69□□□□□ -0.06
VPS28-210ENST00000529182 PRUNE2Q8WUY3 3088 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 IDEP14735 1019 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 CMA1P23946 247 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 AKAP5P24588 427 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 CASP1P29466 404 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 PBX3P40426 434 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 STRN3Q13033 797 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 GLB1LQ6UWU2 654 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 FAM178BQ8IXR5 827 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 LRRC43Q8N309 656 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 ZBTB45Q96K62 511 aaPredicted RBP14.69□□□□□ -0.06
VPS28-210ENST00000529182 ACO2Q99798 780 aaKnown RBP14.69□□□□□ -0.06
VPS28-210ENST00000529182 MRPL4Q9BYD3 311 aaKnown RBP14.69□□□□□ -0.06
VPS28-210ENST00000529182 TNMDQ9H2S6 317 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 GOLPH3LQ9H4A5 285 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 KBTBD4Q9NVX7 518 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 TBC1D7Q9P0N9 293 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 SERTAD1Q9UHV2 236 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 CIZ1Q9ULV3 898 aaPredicted RBP14.69□□□□□ -0.06
VPS28-210ENST00000529182 STXBP5LQ9Y2K9 1186 aa14.69□□□□□ -0.06
VPS28-210ENST00000529182 REV3LO60673 3130 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 NLRC5Q86WI3 1866 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 H3BNC9 293 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 B4GALT3O60512 393 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 CSPG5O95196 566 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 SLC34A2O95436 690 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 MLH1P40692 756 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 NDUFA8P51970 172 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 GPM6BQ13491 265 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 ZC2HC1CQ53FD0 456 aaPredicted RBP14.68□□□□□ -0.06
VPS28-210ENST00000529182 ZBTB33Q86T24 672 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 GRAMD1CQ8IYS0 662 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 MICALL1Q8N3F8 863 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 FSIP1Q8NA03 581 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 CNNM3Q8NE01 707 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 ZFP42Q96MM3 310 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 GAD1Q99259 594 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 ADPGKQ9BRR6 497 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 FGFBP2Q9BYJ0 223 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 TRIM9Q9C026 710 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 CDT1Q9H211 546 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 BLZF1Q9H2G9 400 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 CUEDC2Q9H467 287 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 TBC1D13Q9NVG8 400 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 SNTG2Q9NY99 539 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 KLK14Q9P0G3 267 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 PARP2Q9UGN5 583 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 HPSEQ9Y251 543 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 TNFSF13BQ9Y275 285 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 RWDD3Q9Y3V2 267 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 SPTBN5Q9NRC6 3674 aaKnown RBP14.68□□□□□ -0.06
VPS28-210ENST00000529182 KIAA1671Q9BY89 1806 aa14.68□□□□□ -0.06
VPS28-210ENST00000529182 FRMD3A2A2Y4 597 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 C5orf67F2Z3F1 127 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 ABLIM1O14639 778 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 ACTN4O43707 911 aaKnown RBP14.67□□□□□ -0.06
VPS28-210ENST00000529182 POMCP01189 267 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 HARSP12081 509 aaKnown RBP14.67□□□□□ -0.06
VPS28-210ENST00000529182 AFMP43652 599 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 DCAF4L1Q3SXM0 396 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 ZNF568Q3ZCX4 644 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 HERC4Q5GLZ8 1057 aaPredicted RBP14.67□□□□□ -0.06
VPS28-210ENST00000529182 CEP120Q8N960 986 aa14.67□□□□□ -0.06
VPS28-210ENST00000529182 KLHL23Q8NBE8 558 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms