RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SFNP31947 248 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 FZD5Q13467 585 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 PRR16Q569H4 304 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 PARM1Q6UWI2 310 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 GET4Q7L5D6 327 aaPredicted RBP18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 RDM1Q8NG50 284 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 ATRIPQ8WXE1 791 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 LTB4R2Q9NPC1 389 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 SAMM50Q9Y512 469 aa18.27■□□□□ 0.52
CHMP4A-203ENST00000527154 BAHCC1Q9P281 2608 aa18.27■□□□□ 0.51
CHMP4A-203ENST00000527154 DCDC2BA2VCK2 349 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SHISA7A6NL88 538 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 MSH4O15457 936 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 MAFO75444 373 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 RPS9P46781 194 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 JAK3P52333 1124 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SNW1Q13573 536 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SLC44A4Q53GD3 710 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 XKR3Q5GH77 459 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 MAMSTRQ6ZN01 415 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SLC5A5Q92911 643 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SECISBP2LQ93073 1101 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 FAM126AQ9BYI3 521 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 LRRC2Q9BYS8 371 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 SPATA6Q9NWH7 488 aaPredicted RBP18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 CDH7Q9ULB5 785 aa18.26■□□□□ 0.51
CHMP4A-203ENST00000527154 MYH15Q9Y2K3 1946 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 SLC27A2O14975 620 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 ZMYND10O75800 440 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 RCAN1P53805 252 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 CSTF1Q05048 431 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 NECTIN1Q15223 517 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 CATSPER4Q7RTX7 472 aa18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 SMG8Q8ND04 991 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 SUCLA2Q9P2R7 463 aaPredicted RBP18.25■□□□□ 0.51
CHMP4A-203ENST00000527154 DOCK6Q96HP0 2047 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 SLC30A4O14863 429 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 GAS2O43903 313 aaKnown RBP18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 PSMD10O75832 226 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 POU2F2P09086 479 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 DNM2P50570 870 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 RTN1Q16799 776 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 ZNF687Q8N1G0 1237 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 UBN1Q9NPG3 1134 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 BRPF3Q9ULD4 1205 aa18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 PRG3Q9Y2Y8 225 aaPredicted RBP18.24■□□□□ 0.51
CHMP4A-203ENST00000527154 TMEM150BA6NC51 233 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 POMCP01189 267 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 SPATA31D3P0C874 917 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 FSHRP23945 695 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 HOXA9P31269 272 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 EXOSC10Q01780 885 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 MTERF2Q49AM1 385 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 SPATA31D4Q6ZUB0 917 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 MTSS1LQ765P7 747 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 RHPN2Q8IUC4 686 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 KSR1Q8IVT5 923 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 REXO1Q8N1G1 1221 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 CNNM3Q8NE01 707 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 NETO1Q8TDF5 533 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 PHKBQ93100 1093 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 FAM193BQ96PV7 902 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 MINDY3Q9H8M7 445 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 PIDD1Q9HB75 910 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 FBXW11Q9UKB1 542 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 ATRXP46100 2492 aa18.23■□□□□ 0.51
CHMP4A-203ENST00000527154 FAM208BQ5VWN6 2430 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 F8W810 466 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 LRP3O75074 770 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 CDC27P30260 824 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 PFKPQ01813 784 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 ANO5Q75V66 913 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 SRGAP1Q7Z6B7 1085 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 GSTCDQ8NEC7 633 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 FGF13Q92913 245 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 NELL2Q99435 816 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 GPR62Q9BZJ7 368 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 MIOSQ9NXC5 875 aa18.22■□□□□ 0.51
CHMP4A-203ENST00000527154 ZBTB43O43298 467 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 HNRNPA1P09651 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 MYBP10242 640 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 OR1G1P47890 313 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 UBXN2BQ14CS0 331 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 ZBTB41Q5SVQ8 909 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 CREB3L3Q68CJ9 461 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 SYNE3Q6ZMZ3 975 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 PALB2Q86YC2 1186 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 ST13P5Q8NFI4 369 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 NLRP4Q96MN2 994 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 SEPT9Q9UHD8 586 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 USP18Q9UMW8 372 aa18.21■□□□□ 0.51
CHMP4A-203ENST00000527154 ZMYM2Q9UBW7 1377 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms