RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 AMHR2Q16671 573 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 KYAT1Q16773 422 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 LONRF3Q496Y0 759 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 TPRNQ4KMQ1 711 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 EPC2Q52LR7 807 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 NAALADL2Q58DX5 795 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ARSHQ5FYA8 562 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 HERC4Q5GLZ8 1057 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 AXDND1Q5T1B0 1012 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ADALQ6DHV7 355 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 HAUS6Q7Z4H7 955 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 THNSL1Q8IYQ7 743 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 DAW1Q8N136 415 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 MICALL1Q8N3F8 863 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 FSIP1Q8NA03 581 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 HELQQ8TDG4 1101 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 GDPD5Q8WTR4 605 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYLIPQ8WY64 445 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPS27Q92552 414 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 PPP2R3CQ969Q6 453 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZNF689Q96CS4 500 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 HVCN1Q96D96 273 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 NTPCRQ9BSD7 190 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 C17orf80Q9BSJ5 609 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 CCDC94Q9BW85 323 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 CCDC113Q9H0I3 377 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 PDZD7Q9H5P4 517 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPL44Q9H9J2 332 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 POLD4Q9HCU8 107 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 TOPORSQ9NS56 1045 aaPredicted RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 PANK4Q9NVE7 773 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ARHGAP28Q9P2N2 729 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ANKFY1Q9P2R3 1169 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 PARP2Q9UGN5 583 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 PUF60Q9UHX1 559 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 HOOK1Q9UJC3 728 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 TNFSF13BQ9Y275 285 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 STXBP5LQ9Y2K9 1186 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 GIT1Q9Y2X7 761 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZDHHC9Q9Y397 364 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 IPPQ9Y573 584 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPL42Q9Y6G3 142 aaKnown RBP5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 LOXHD1Q8IVV2 1947 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZMYM2Q9UBW7 1377 aa5.93□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A1W2PQ27 194 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A1W2PQ64 194 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 A0A1W2PQD8 194 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYMKA6NI61 221 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 H3BNC9 293 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 CLDN3O15551 220 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 LPXNO60711 386 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZC3H11AO75152 810 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TOM1L1O75674 476 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GCNT3O95395 438 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MYL1P05976 194 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 SLFN14P0C7P3 912 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MAPTP10636 758 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MCF2P10911 925 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 HARSP12081 509 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 PFKFB1P16118 471 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ATF7P17544 494 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MLH1P40692 756 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GATMP50440 423 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZNF131P52739 623 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 NCKAP1LP55160 1127 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 UBE3AQ05086 875 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 HSP90AA2PQ14568 343 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 NOLC1Q14978 699 aaKnown RBP eCLIP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 SKIV2LQ15477 1246 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TIGD5Q53EQ6 642 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 CLLU1OSQ5K130 101 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 UBXN11Q5T124 520 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 KANK3Q6NY19 840 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MPZL3Q6UWV2 235 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZPBP2Q6X784 338 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MRPL10Q7Z7H8 261 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZBTB33Q86T24 672 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ZNF598Q86UK7 904 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 CDR2LQ86X02 465 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 SFR1Q86XK3 245 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 SYCP3Q8IZU3 236 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 COLGALT1Q8NBJ5 622 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMEM87AQ8NBN3 555 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TMEM161BQ8NDZ6 487 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 MAFAQ8NHW3 353 aaPredicted RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 CLP1Q92989 425 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 LPPQ93052 612 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 P2RX5Q93086 422 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GUCD1Q96NT3 240 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 CASD1Q96PB1 797 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 ACO2Q99798 780 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 EIF2AQ9BY44 585 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GBP3Q9H0R5 595 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 LMAN2LQ9H0V9 348 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 NXF3Q9H4D5 531 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 RC3H2Q9HBD1 1191 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 GDPD2Q9HCC8 539 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 OLFML3Q9NRN5 406 aa5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 TYW1Q9NV66 732 aaKnown RBP5.92□□□□□ -1.46
HMGB1P40-201ENST00000525121 EXOC1Q9NV70 894 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms