RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 ENPEPQ07075 957 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 CELF3Q5SZQ8 465 aaKnown RBP28.04■■■□□ 2.08
COL13A1-214ENST00000522165 KRT39Q6A163 491 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 U2AF1L4Q8WU68 220 aaKnown RBP28.04■■■□□ 2.08
COL13A1-214ENST00000522165 PNKPQ96T60 521 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 RHOXF2Q9BQY4 288 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 PNMA3Q9UL41 463 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 COQ4Q9Y3A0 265 aa28.04■■■□□ 2.08
COL13A1-214ENST00000522165 UNCXA6NJT0 531 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 CYP2C8P10632 490 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 LIG4P49917 911 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 STRN3Q13033 797 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 CC2D1AQ6P1N0 951 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-214ENST00000522165 USP37Q86T82 979 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 DNAAF5Q86Y56 855 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 DEPTORQ8TB45 409 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 POP1Q99575 1024 aaKnown RBP28.03■■■□□ 2.08
COL13A1-214ENST00000522165 GPR20Q99678 358 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 AZI2Q9H6S1 392 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 OGFRQ9NZT2 677 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 CLEC11AQ9Y240 323 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 SPDYE4A6NLX3 237 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 H2AFZP0C0S5 128 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 GTF2H1P32780 548 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 BRD3Q15059 726 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 H2AFVQ71UI9 128 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 GLYCTKQ8IVS8 523 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 GTF3C2Q8WUA4 911 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-214ENST00000522165 FAM167AQ96KS9 214 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 STYXL1Q9Y6J8 313 aa28.03■■■□□ 2.08
COL13A1-214ENST00000522165 ZNFX1Q9P2E3 1918 aaKnown RBP28.02■■■□□ 2.08
COL13A1-214ENST00000522165 GRID2IPA4D2P6 1211 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 CCDC151A5D8V7 595 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 LRRIQ4A6NIV6 560 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 ZNF572Q7Z3I7 529 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-214ENST00000522165 FBXO16Q8IX29 292 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-214ENST00000522165 SEMA4DQ92854 862 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 FAM213AQ9BRX8 229 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 PPME1Q9Y570 386 aa28.02■■■□□ 2.08
COL13A1-214ENST00000522165 LOC102724159A0A0B4J2E5 919 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 MAFO75444 373 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-214ENST00000522165 LGR5O75473 907 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 PIGRP01833 764 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 POTEJP0CG39 1038 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 PWP2Q15269 919 aaKnown RBP28.01■■■□□ 2.07
COL13A1-214ENST00000522165 HSDL1Q3SXM5 330 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 CCDC62Q6P9F0 684 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 ZNF408Q9H9D4 720 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 TOPORSQ9NS56 1045 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-214ENST00000522165 SIP14410 1827 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 EXTL3O43909 919 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 MEI1Q5TIA1 1274 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 EFCC1Q9HA90 598 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 KIAA1586Q9HCI6 787 aa28.01■■■□□ 2.07
COL13A1-214ENST00000522165 K7ERI5 159 aa28■■■□□ 2.07
COL13A1-214ENST00000522165 SEC31AO94979 1220 aaKnown RBP28■■■□□ 2.07
COL13A1-214ENST00000522165 FTCDO95954 541 aa28■■■□□ 2.07
COL13A1-214ENST00000522165 GPC3P51654 580 aa28■■■□□ 2.07
COL13A1-214ENST00000522165 IFI16Q16666 785 aaKnown RBP28■■■□□ 2.07
COL13A1-214ENST00000522165 MAP1SQ66K74 1059 aaPredicted RBP28■■■□□ 2.07
COL13A1-214ENST00000522165 FAM53CQ9NYF3 392 aa28■■■□□ 2.07
COL13A1-214ENST00000522165 A0A0A6YYK5 440 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-214ENST00000522165 ZNF233A6NK53 670 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 BBXQ8WY36 941 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-214ENST00000522165 GLG1Q92896 1179 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 PSMB7Q99436 277 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 MCM3APO60318 1980 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 TULP1O00294 542 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-214ENST00000522165 NOP56O00567 594 aaKnown RBP27.99■■■□□ 2.07
COL13A1-214ENST00000522165 KIAA0391O15091 583 aaKnown RBP27.99■■■□□ 2.07
COL13A1-214ENST00000522165 TNFAIP3P21580 790 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 CXCR5P32302 372 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 FBXL13Q8NEE6 735 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 KAT5Q92993 513 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 ARFGAP3Q9NP61 516 aa27.99■■■□□ 2.07
COL13A1-214ENST00000522165 TUBBP07437 444 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 DLATP10515 647 aaKnown RBP27.98■■■□□ 2.07
COL13A1-214ENST00000522165 GALCP54803 685 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 ITIH3Q06033 890 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 CAPSQ13938 189 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 PLPPR4Q7Z2D5 763 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 DHX37Q8IY37 1157 aaKnown RBP27.98■■■□□ 2.07
COL13A1-214ENST00000522165 GPRC5AQ8NFJ5 357 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 PSPC1Q8WXF1 523 aaKnown RBP27.98■■■□□ 2.07
COL13A1-214ENST00000522165 MS4A4AQ96JQ5 239 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 KREMEN1Q96MU8 473 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 SPATA33Q96N06 139 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 AGPAT1Q99943 283 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 TMEM134Q9H6X4 195 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 ASB14A6NK59 587 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 CETPP11597 493 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 NOP2P46087 812 aaKnown RBP27.98■■■□□ 2.07
COL13A1-214ENST00000522165 SV2AQ7L0J3 742 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 TRIM50Q86XT4 487 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 TAS1R2Q8TE23 839 aa27.98■■■□□ 2.07
COL13A1-214ENST00000522165 PDHXO00330 501 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 GRIN3BO60391 1043 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 MARK3P27448 753 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 SLFN12LQ6IEE8 588 aa27.97■■■□□ 2.07
COL13A1-214ENST00000522165 PPM1KQ8N3J5 372 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms