RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 ELL2O00472 640 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 HNRNPDLO14979 420 aaKnown RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 PIP5K1BO14986 540 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC16A6O15403 523 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ARHGAP6O43182 974 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 HOXC11O43248 304 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 DAPK3O43293 454 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 THAP12O43422 761 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 BUB1BO60566 1050 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 MTA2O94776 668 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 RTN3O95197 1032 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 WISP1O95388 367 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FUCA1P04066 466 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 NFICP08651 508 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZNF865P0CJ78 1059 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 GLULP15104 373 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SYN1P17600 705 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FGFR2P21802 821 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 AMPD1P23109 780 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ACTN2P35609 894 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ATP6V1E1P36543 226 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SERPINF1P36955 418 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 MAP2K3P46734 347 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 CASP6P55212 293 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SNX16P57768 344 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 DCAF7P61962 342 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 PFKPQ01813 784 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ROR1Q01973 937 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ADCY2Q08462 1091 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 NOGQ13253 232 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 CDK5R2Q13319 367 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SEC23AQ15436 765 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SURF1Q15526 300 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM110CQ1W6H9 321 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 KHDC1LQ5JSQ8 128 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FAM26FQ5R3K3 315 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 LCE2DQ5TA82 110 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 RRAGBQ5VZM2 374 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 KLHL17Q6TDP4 642 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 C20orf204Q6ZNR8 217 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 GADL1Q6ZQY3 521 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 NEK10Q6ZWH5 1172 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 BRINP3Q76B58 766 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 RSPH3Q86UC2 560 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 CCDC117Q8IWD4 279 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZNF713Q8N859 430 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 RNF152Q8N8N0 203 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 C2CD4AQ8NCU7 369 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 STYXQ8WUJ0 223 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 RILPL2Q969X0 211 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZUFSPQ96AP4 578 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 CCDC34Q96HJ3 373 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 GBP4Q96PP9 640 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 KCNC2Q96PR1 638 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 MPHOSPH8Q99549 860 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 COLEC11Q9BWP8 271 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 LSM14BQ9BX40 385 aaKnown RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 BRIP1Q9BX63 1249 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 HDAC8Q9BY41 377 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FOXP3Q9BZS1 431 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 WNT8AQ9H1J5 351 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 DHX36Q9H2U1 1008 aaKnown RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 SEPSECSQ9HD40 501 aaKnown RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 TDP1Q9NUW8 608 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 TBC1D23Q9NUY8 699 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 PNPOQ9NVS9 261 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 GULP1Q9UBP9 304 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 AFF4Q9UHB7 1163 aaKnown RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 FEZ2Q9UHY8 353 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 VPS28Q9UK41 221 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 TCFL5Q9UL49 500 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 PCDHA1Q9Y5I3 950 aa4.14□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A087X0M5 115 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1B0GX30 115 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 A0A1W2PPC4 97 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PRAMEF22A3QJZ6 481 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MEGF11A6BM72 1044 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 PGPEP1LA6NFU8 196 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TRIM64A6NGJ6 449 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TRIM64BA6NI03 449 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 AP3D1O14617 1153 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 CLGNO14967 610 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC27A2O14975 620 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 DKC1O60832 514 aaKnown RBP eCLIP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 DEAF1O75398 565 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TADA3O75528 432 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 FSBPO95073 299 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 ZNF205O95201 554 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 TNFRSF6BO95407 300 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 MMEP08473 750 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 UBA7P41226 1012 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 KCNJ5P48544 419 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 POLD2P49005 469 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 FNTBP49356 437 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 HK3P52790 923 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 NR1H2P55055 460 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 SLC6A3Q01959 620 aa4.13□□□□□ -1.75
HMGB1P22-201ENST00000505315 NRG1Q02297 640 aaPredicted RBP4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms