RNA–Protein interactions for RNA: ENST00000504290.5

TP53-208, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-208ENST00000504290 RIPK2O43353 540 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 NMT2O60551 498 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 LMNAP02545 664 aaKnown RBP12.83□□□□□ -0.36
TP53-208ENST00000504290 PDHA1P08559 390 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 RARGP13631 454 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 NPR1P16066 1061 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 RXRBP28702 533 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 TECP42680 631 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 TUBP50607 506 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 MAPK7Q13164 816 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 MAEAQ7L5Y9 396 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 SLC51AQ86UW1 340 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 JAMLQ86YT9 394 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 ZNF444Q8N0Y2 327 aaPredicted RBP12.83□□□□□ -0.36
TP53-208ENST00000504290 RBBP8NLQ8NC74 664 aaPredicted RBP12.83□□□□□ -0.36
TP53-208ENST00000504290 RBM41Q96IZ5 413 aaKnown RBP12.83□□□□□ -0.36
TP53-208ENST00000504290 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 USP40Q9NVE5 1235 aa12.83□□□□□ -0.36
TP53-208ENST00000504290 ZMYND8Q9ULU4 1186 aaPredicted RBP12.83□□□□□ -0.36
TP53-208ENST00000504290 UPP2O95045 317 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 EYA4O95677 639 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 TSPY3P0CV98 308 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 TSPY8P0CW00 308 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 EPS15P42566 896 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 GRM4Q14833 912 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 MFSD14BQ5SR56 506 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 ZNF772Q68DY9 489 aaPredicted RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 DYMQ7RTS9 669 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 SESTD1Q86VW0 696 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 KIFAP3Q92845 792 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 IFT43Q96FT9 208 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 RPS6KC1Q96S38 1066 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 PIDD1Q9HB75 910 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 CHCHD3Q9NX63 227 aaKnown RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 SNX24Q9Y343 169 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 TMEM120BA0PK00 339 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 EIF4E1BA6NMX2 242 aaKnown RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 GALR2O43603 387 aaPredicted RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 CCNT1O60563 726 aaKnown RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 GRB10Q13322 594 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 PTPROQ16827 1216 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 LRRC23Q53EV4 343 aaPredicted RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 OR52E8Q6IFG1 317 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 KRT25Q7Z3Z0 450 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 FAM136AQ96C01 138 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 RMDN2Q96LZ7 410 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 SERPINB12Q96P63 405 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 NUDCD1Q96RS6 583 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 BARHL2Q9NY43 387 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 GRHL1Q9NZI5 618 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 SCOCQ9UIL1 159 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 DBR1Q9UK59 544 aaKnown RBP12.82□□□□□ -0.36
TP53-208ENST00000504290 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
TP53-208ENST00000504290 COL11A2P13942 1736 aaPredicted RBP12.81□□□□□ -0.36
TP53-208ENST00000504290 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 HSPA6P17066 643 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 PTDSS1P48651 473 aaKnown RBP12.81□□□□□ -0.36
TP53-208ENST00000504290 SETDB1Q15047 1291 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 LRRC14Q15048 493 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 MTFR1Q15390 333 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 POTEEQ6S8J3 1075 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 C16orf86Q6ZW13 317 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 MAPKAPK5Q8IW41 473 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 FBXO41Q8TF61 875 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 ARHGEF2Q92974 986 aaKnown RBP12.81□□□□□ -0.36
TP53-208ENST00000504290 DYNLL2Q96FJ2 89 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 CDK5RAP3Q96JB5 506 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 TAOK3Q9H2K8 898 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
TP53-208ENST00000504290 DDX3YO15523 660 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 AFPP02771 609 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 CHRNA3P32297 505 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 SLCO1A2P46721 670 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 RASSF2P50749 326 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 NONOQ15233 471 aaKnown RBP eCLIP12.8□□□□□ -0.36
TP53-208ENST00000504290 LETM2Q2VYF4 491 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 FAM13CQ8NE31 585 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 GLG1Q92896 1179 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 MAGEB18Q96M61 343 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 DCLRE1BQ9H816 532 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 LRCH1Q9Y2L9 728 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 MROH7Q68CQ1 1323 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 GFPT2O94808 682 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 UCHL3P15374 230 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 RASA1P20936 1047 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 MGAT5Q09328 741 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 LRRC41Q15345 812 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 VSTM1Q6UX27 236 aa12.8□□□□□ -0.36
TP53-208ENST00000504290 INTS8Q75QN2 995 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 TRMT10CQ7L0Y3 403 aaKnown RBP12.8□□□□□ -0.36
TP53-208ENST00000504290 NEK8Q86SG6 692 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms