RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 N4BP3O15049 544 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 NPTXRO95502 500 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 LINC00271P0C7V0 271 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 IDEP14735 1019 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 GAP43P17677 238 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 SYKP43405 635 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 AFMP43652 599 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 ERVK-21P61565 698 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TMEM132AQ24JP5 1023 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 CLLU1OSQ5K130 101 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 ATF7IP2Q5U623 682 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 EEF1DP3Q658K8 133 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 CNNM4Q6P4Q7 775 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 AGMOQ6ZNB7 445 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 SFR1Q86XK3 245 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 CEP57L1Q8IYX8 460 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 HELQQ8TDG4 1101 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TGS1Q96RS0 853 aaKnown RBP14.89□□□□□ -0.03
COL1A1-208ENST00000494334 ACO2Q99798 780 aaKnown RBP14.89□□□□□ -0.03
COL1A1-208ENST00000494334 C7orf25Q9BPX7 421 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 C17orf80Q9BSJ5 609 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TARS2Q9BW92 718 aaKnown RBP14.89□□□□□ -0.03
COL1A1-208ENST00000494334 MRPL4Q9BYD3 311 aaKnown RBP14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TRIM6Q9C030 488 aaPredicted RBP14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TMEM117Q9H0C3 514 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 RNF39Q9H2S5 420 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 PANK4Q9NVE7 773 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 SEL1LQ9UBV2 794 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 TNFSF13BQ9Y275 285 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 HES2Q9Y543 173 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 GBF1Q92538 1859 aa14.89□□□□□ -0.03
COL1A1-208ENST00000494334 COL4A6Q14031 1691 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-208ENST00000494334 GOLGA6L4A6NEF3 574 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 OFD1O75665 1012 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ITGA4P13612 1032 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 CASP1P29466 404 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 GTF2BQ00403 316 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 STRN3Q13033 797 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 HERC4Q5GLZ8 1057 aaPredicted RBP14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ZNF720Q7Z2F6 126 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 GRAMD1CQ8IYS0 662 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ABI1Q8IZP0 508 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ARNTL2Q8WYA1 636 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 CLP1Q92989 425 aaKnown RBP14.88□□□□□ -0.03
COL1A1-208ENST00000494334 PAGE5Q96GU1 130 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 GUCD1Q96NT3 240 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ADPGKQ9BRR6 497 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 BLZF1Q9H2G9 400 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 NXF3Q9H4D5 531 aaKnown RBP14.88□□□□□ -0.03
COL1A1-208ENST00000494334 ST6GALNAC4Q9H4F1 302 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 PTPRHQ9HD43 1115 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 TBC1D7Q9P0N9 293 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 USP25Q9UHP3 1055 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 MTUS1Q9ULD2 1270 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 TBX20Q9UMR3 447 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 MRPL42Q9Y6G3 142 aaKnown RBP14.88□□□□□ -0.03
COL1A1-208ENST00000494334 CDH23Q9H251 3354 aa14.88□□□□□ -0.03
COL1A1-208ENST00000494334 EPOPA6NHQ4 379 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 RFXAPO00287 272 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 ZNF202O95125 648 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 SCP2P22307 547 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 PROZP22891 400 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 ASIC1P78348 528 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 CUL4BQ13620 913 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 ZC2HC1CQ53FD0 456 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-208ENST00000494334 LRRC55Q6ZSA7 311 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 CCDC65Q8IXS2 484 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 TMEM192Q8IY95 271 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 SLC17A8Q8NDX2 589 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 ZBTB45Q96K62 511 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-208ENST00000494334 CDX2Q99626 313 aaPredicted RBP14.87□□□□□ -0.03
COL1A1-208ENST00000494334 STRA6Q9BX79 667 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 PRDM12Q9H4Q4 367 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 MRPL44Q9H9J2 332 aaKnown RBP14.87□□□□□ -0.03
COL1A1-208ENST00000494334 RSAD1Q9HA92 442 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 OLFML3Q9NRN5 406 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 TYW1Q9NV66 732 aaKnown RBP14.87□□□□□ -0.03
COL1A1-208ENST00000494334 HCSTQ9UBK5 93 aa14.87□□□□□ -0.03
COL1A1-208ENST00000494334 ABLIM1O14639 778 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 PPP1R37O75864 691 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 AKAP5P24588 427 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 BMPR1AP36894 532 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 AFF1P51825 1210 aaKnown RBP14.86□□□□□ -0.03
COL1A1-208ENST00000494334 COASYQ13057 564 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 CSPP1Q1MSJ5 1256 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 DCAF4L1Q3SXM0 396 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 EPC2Q52LR7 807 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 GLB1LQ6UWU2 654 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 ZPBP2Q6X784 338 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 KRBA2Q6ZNG9 492 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 UNC13DQ70J99 1090 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 MAP4K3Q8IVH8 894 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 SAMD11Q96NU1 681 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 APOL6Q9BWW8 343 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 FGFBP2Q9BYJ0 223 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 CWH43Q9H720 699 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 UBN1Q9NPG3 1134 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 SNTG2Q9NY99 539 aa14.86□□□□□ -0.03
COL1A1-208ENST00000494334 GIT1Q9Y2X7 761 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms