RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 L1TD1Q5T7N2 865 aaKnown RBP21.27■■□□□ 1
PCOLCE-208ENST00000487172 ATF7IP2Q5U623 682 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 SLC27A1Q6PCB7 646 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 CRIPAKQ8N1N5 446 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 SMARCE1Q969G3 411 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 TOP1MTQ969P6 601 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 FGFBP2Q9BYJ0 223 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 CLSTN2Q9H4D0 955 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 TMEM206Q9H813 350 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 PTPRHQ9HD43 1115 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 RMND1Q9NWS8 449 aa21.27■■□□□ 1
PCOLCE-208ENST00000487172 CEP290O15078 2479 aa21.27■□□□□ 0.99
PCOLCE-208ENST00000487172 PROZP22891 400 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 STK4Q13043 487 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 ACCSQ96QU6 501 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 TARS2Q9BW92 718 aaKnown RBP21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 PDZD7Q9H5P4 517 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 FAM105AQ9NUU6 356 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 EXOC7Q9UPT5 735 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 UBE4BO95155 1302 aa21.26■□□□□ 0.99
PCOLCE-208ENST00000487172 TOM1L1O75674 476 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 EOMESO95936 686 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 DEFB103AP81534 67 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 BMT2Q1RMZ1 405 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 MRPL10Q7Z7H8 261 aaKnown RBP21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 ECHDC2Q86YB7 292 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 KIAA0895Q8NCT3 520 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 GLIS3Q8NEA6 775 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 ADPGKQ9BRR6 497 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 GTPBP4Q9BZE4 634 aaKnown RBP21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 SLC39A2Q9NP94 309 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 TMEM161AQ9NX61 479 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 USP20Q9Y2K6 914 aa21.25■□□□□ 0.99
PCOLCE-208ENST00000487172 PTPRSQ13332 1948 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 ABLIM1O14639 778 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 PRPF6O94906 941 aaKnown RBP21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 STAG3L1P0CL83 205 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 CAMK4Q16566 473 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 TMEM132AQ24JP5 1023 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 EEF1DP3Q658K8 133 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 APBB1IPQ7Z5R6 666 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 ZNF598Q86UK7 904 aaKnown RBP21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 NPAS4Q8IUM7 802 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 MYOCDQ8IZQ8 938 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 SCFD1Q8WVM8 642 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 ERCC4Q92889 916 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 NUP62CLQ9H1M0 184 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 COLQQ9Y215 455 aaPredicted RBP21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 PCDHB7Q9Y5E2 793 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 PCDHB2Q9Y5E7 798 aa21.24■□□□□ 0.99
PCOLCE-208ENST00000487172 ATP2A2P16615 1042 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 LIG4P49917 911 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 KCNA1Q09470 495 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 DCAF4L1Q3SXM0 396 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 MPZL3Q6UWV2 235 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 CDR2LQ86X02 465 aaPredicted RBP21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 BICD1Q96G01 975 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 EIF2AQ9BY44 585 aaKnown RBP21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 KIAA1468Q9P260 1216 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 STYXL1Q9Y6J8 313 aa21.23■□□□□ 0.99
PCOLCE-208ENST00000487172 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 HNRNPDLO14979 420 aaKnown RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 KIF20AO95235 890 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 GJB5O95377 273 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 NPTXRO95502 500 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 ATF7P17544 494 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 HOXD13P35453 343 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 MCL1Q07820 350 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 COBLL1Q53SF7 1204 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 ZNF658Q5TYW1 1059 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 SLFN12LQ6IEE8 588 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 SLC39A4Q6P5W5 647 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 HERC6Q8IVU3 1022 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 SMG8Q8ND04 991 aaKnown RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 PGBD4Q96DM1 585 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 ZBTB45Q96K62 511 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 TRIM6Q9C030 488 aaPredicted RBP21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 MAN1B1Q9UKM7 699 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 IPPQ9Y573 584 aa21.22■□□□□ 0.99
PCOLCE-208ENST00000487172 CLDN3O15551 220 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 MCF2P10911 925 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 SNRPFP62306 86 aaKnown RBP21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 ZNF568Q3ZCX4 644 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 HACE1Q8IYU2 909 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 SYCP3Q8IZU3 236 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 GUF1Q8N442 669 aaKnown RBP21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 TRIML1Q8N9V2 468 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 TCHPQ9BT92 498 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 CDT1Q9H211 546 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 LRFN2Q9ULH4 789 aa21.21■□□□□ 0.99
PCOLCE-208ENST00000487172 ANKRD63C9JTQ0 380 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 DGKIO75912 1065 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 UPP2O95045 317 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 HTRA4P83105 476 aaPredicted RBP21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 KNOP1Q1ED39 458 aaKnown RBP21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 RSPH1Q8WYR4 309 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 GBP3Q9H0R5 595 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 UBN1Q9NPG3 1134 aa21.2■□□□□ 0.98
PCOLCE-208ENST00000487172 GDAQ9Y2T3 454 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms