RNA–Protein interactions for RNA: ENST00000486515.1

UBR4-214, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-214ENST00000486515 TOX2Q96NM4 488 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 FDXACB1Q9BRP7 624 aaPredicted RBP7.62□□□□□ -1.19
UBR4-214ENST00000486515 NFKBIZQ9BYH8 718 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 CELF4Q9BZC1 486 aaKnown RBP7.62□□□□□ -1.19
UBR4-214ENST00000486515 GBP3Q9H0R5 595 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 DNAJC25Q9H1X3 360 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 ST6GALNAC4Q9H4F1 302 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 PRDM5Q9NQX1 630 aaPredicted RBP7.62□□□□□ -1.19
UBR4-214ENST00000486515 TMEM39AQ9NV64 488 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 TBX20Q9UMR3 447 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 CTNND2Q9UQB3 1225 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 FRMD4BQ9Y2L6 1034 aa7.62□□□□□ -1.19
UBR4-214ENST00000486515 DCHS1Q96JQ0 3298 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 WDR81Q562E7 1941 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 PES1O00541 588 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 PDXKO00764 312 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 N4BP3O15049 544 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 KIAA0391O15091 583 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 CLDN3O15551 220 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 RPS6KA5O75582 802 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 PRPF6O94906 941 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 GNA14O95837 355 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 CLTBP09497 229 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 CTSHP09668 335 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 MYBP10242 640 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 EPB41P11171 864 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 SKIP12755 728 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 CCNE1P24864 410 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 PRCPP42785 496 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 GPC3P51654 580 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 PTENP60484 403 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ADAM17P78536 824 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ZNF200P98182 395 aaPredicted RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 GTF2BQ00403 316 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 FKBP3Q00688 224 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 PLCB2Q00722 1185 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 MYL5Q02045 173 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 NFX1Q12986 1120 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 MAPK7Q13164 816 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 PAK2Q13177 524 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 KYAT1Q16773 422 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 DPCR1Q3MIW9 517 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 CCDC40Q4G0X9 1142 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 COBLL1Q53SF7 1204 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 C1orf53Q5VUE5 145 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 RUFY4Q6ZNE9 571 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ANKRD33Q7Z3H0 272 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 RPAINQ86UA6 219 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 KSR1Q8IVT5 923 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 SMYD4Q8IYR2 804 aaPredicted RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 CSGALNACT2Q8N6G5 542 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 SLC43A3Q8NBI5 491 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 TMEM161BQ8NDZ6 487 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ZNF507Q8TCN5 953 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 FAM200AQ8TCP9 573 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ASAP3Q8TDY4 903 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 LRRC15Q8TF66 581 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 POMGNT1Q8WZA1 660 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 P2RX5Q93086 422 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ZNF668Q96K58 619 aaPredicted RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 OSMRQ99650 979 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 TRPV6Q9H1D0 765 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 HIPK3Q9H422 1215 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 KIAA1586Q9HCI6 787 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 TYW1Q9NV66 732 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 RWDD2AQ9UIY3 292 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 GDAQ9Y2T3 454 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 R3HCC1Q9Y3T6 440 aaKnown RBP7.61□□□□□ -1.19
UBR4-214ENST00000486515 CDY2AQ9Y6F7 541 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 FRMPD3Q5JV73 1810 aa7.61□□□□□ -1.19
UBR4-214ENST00000486515 GOLGA6L3A6NEY3 463 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 PITPNM1O00562 1244 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 ACKR2O00590 384 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 IKBKBO14920 756 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 EXOC3O60645 756 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 TOM1L1O75674 476 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 CKBP12277 381 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 KRT13P13646 458 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 DARSP14868 501 aaKnown RBP7.6□□□□□ -1.19
UBR4-214ENST00000486515 RAG1P15918 1043 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 SELPP16109 830 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 HOXC8P31273 242 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 CDK7P50613 346 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 YARSP54577 528 aaKnown RBP7.6□□□□□ -1.19
UBR4-214ENST00000486515 STX17P56962 302 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 TLE2Q04725 743 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 SPAG1Q07617 926 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 ADAM9Q13443 819 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 DRP2Q13474 957 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 EDRF1Q3B7T1 1238 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 DCAF4L1Q3SXM0 396 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 TRIM60Q495X7 471 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 FILIP1LQ4L180 1135 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 ZC2HC1CQ53FD0 456 aaPredicted RBP7.6□□□□□ -1.19
UBR4-214ENST00000486515 ATF7IP2Q5U623 682 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 SPATA1Q5VX52 437 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 CEP135Q66GS9 1140 aa7.6□□□□□ -1.19
UBR4-214ENST00000486515 CDCA2Q69YH5 1023 aaPredicted RBP7.6□□□□□ -1.19
UBR4-214ENST00000486515 NOTUMQ6P988 496 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms