RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 EML1O00423 815 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 EVI5O60447 810 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 ABL1P00519 1130 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF667Q5HYK9 610 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 CDKAL1Q5VV42 579 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 FYB2Q5VWT5 728 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 FBXL13Q8NEE6 735 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 SYTL5Q8TDW5 730 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 SCFD1Q8WVM8 642 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 MS4A14Q96JA4 679 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 CCT8L2Q96SF2 557 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 PLS3P13797 630 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 CDO1Q16878 200 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 C10orf76Q5T2E6 689 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 NT5DC1Q5TFE4 455 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 OR6B2Q6IFH4 312 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 POTEAQ6S8J7 498 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 CTAGE3PQ8IX95 158 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 SLC30A5Q8TAD4 765 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
SMPD4-218ENST00000482171 MOV10L1Q9BXT6 1211 aaKnown RBP12.1□□□□□ -0.47
SMPD4-218ENST00000482171 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 LDHAP00338 332 aaKnown RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 MYL3P08590 195 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 SOX5P35711 763 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 TAF11Q15544 211 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 SNRNP35Q16560 246 aaKnown RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 EPC2Q52LR7 807 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 C9orf131Q5VYM1 1079 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 GPD1LQ8N335 351 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 MAIP1Q8WWC4 291 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 HVCN1Q96D96 273 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 PURBQ96QR8 312 aaKnown RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 POLR3CQ9BUI4 534 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 ROBO1Q9Y6N7 1651 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 SNX16P57768 344 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 MDM2Q00987 491 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 TMEM62Q0P6H9 643 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 CENPPQ6IPU0 288 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 ATP6V1G3Q96LB4 118 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 FMO2Q99518 471 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 TARS2Q9BW92 718 aaKnown RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 SNX12Q9UMY4 172 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF699Q32M78 642 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 CYP4F22Q6NT55 531 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 FASTKD5Q7L8L6 764 aaKnown RBP12.09□□□□□ -0.47
SMPD4-218ENST00000482171 SEPT1Q8WYJ6 367 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 USP20Q9Y2K6 914 aa12.09□□□□□ -0.47
SMPD4-218ENST00000482171 KRT1P04264 644 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 FGRP09769 529 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 ACTR2P61160 394 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 MKRN4PQ13434 485 aaPredicted RBP12.08□□□□□ -0.47
SMPD4-218ENST00000482171 ANKRD20A3Q5VUR7 823 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 ZNF473Q8WTR7 871 aaKnown RBP12.08□□□□□ -0.47
SMPD4-218ENST00000482171 PDCD2LQ9BRP1 358 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 CBWD1Q9BRT8 395 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 CD248Q9HCU0 757 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 FAM114A2Q9NRY5 505 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.47
SMPD4-218ENST00000482171 PDE4DIPQ5VU43 2346 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 MMEP08473 750 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ATF2P15336 505 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ELF1P32519 619 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 GPC5P78333 572 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 CLUL1Q15846 466 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 SLC18A3Q16572 532 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 PBKQ96KB5 322 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 GBP5Q96PP8 586 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 RAB3IPQ96QF0 476 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ERGIC2Q96RQ1 377 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 YIPF3Q9GZM5 350 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 PASKQ96RG2 1323 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 IQCA1LA6NCM1 817 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 H7C0C1 242 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 LSP1P33241 339 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ATP5OP48047 213 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 RASSF2P50749 326 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 KIF22Q14807 665 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 EMC2Q15006 297 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 GLE1Q53GS7 698 aaKnown RBP12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ERICH1Q86X53 443 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 CCDC13Q8IYE1 715 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ANKRD13AQ8IZ07 590 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 OR6B3Q8NGW1 331 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 SPDL1Q96EA4 605 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 LACRTQ9GZZ8 138 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 HAUS2Q9NVX0 235 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 PHLPP1O60346 1717 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 ADAMTS3O15072 1205 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 AKAP3O75969 853 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 VIL1P09327 827 aaKnown RBP12.08□□□□□ -0.48
SMPD4-218ENST00000482171 KLRC1P26715 233 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 GALCP54803 685 aa12.08□□□□□ -0.48
SMPD4-218ENST00000482171 PPP2R5EQ16537 467 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms