RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 LIMD1Q9UGP4 676 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 USP20Q9Y2K6 914 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 FAN1Q9Y2M0 1017 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 MYO10Q9HD67 2058 aa12.99□□□□□ -0.33
VARS2-208ENST00000477052 PIEZO1Q92508 2521 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 ARL5CA6NH57 179 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 NEMFO60524 1076 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 USO1O60763 962 aaKnown RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 ALDH2P05091 517 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 SPATA31D3P0C874 917 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 NCLP19338 710 aaKnown RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 GLRA2P23416 452 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 AKAP5P24588 427 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 MCM7P33993 719 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 SCNN1GP51170 649 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 ANAPC15P60006 121 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 PTENP60484 403 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 MBTD1Q05BQ5 628 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 ITIH3Q06033 890 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 TCF15Q12870 199 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 AMHR2Q16671 573 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 SPATA31D4Q6ZUB0 917 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 CABP7Q86V35 215 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 POLR3FQ9H1D9 316 aaPredicted RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 NXF3Q9H4D5 531 aaKnown RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 POLD4Q9HCU8 107 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 BRMS1Q9HCU9 246 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 MARCH5Q9NX47 278 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 KLK14Q9P0G3 267 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 DBR1Q9UK59 544 aaKnown RBP12.98□□□□□ -0.33
VARS2-208ENST00000477052 NR2E1Q9Y466 385 aa12.98□□□□□ -0.33
VARS2-208ENST00000477052 KMT2EQ8IZD2 1858 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 TTLL13PA6NNM8 815 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 ASAP2O43150 1006 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 LILRB3O75022 631 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 NPTXRO95502 500 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 ARF4P18085 180 aaPredicted RBP12.97□□□□□ -0.33
VARS2-208ENST00000477052 ARL2P36404 184 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 MTHFRP42898 656 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 RARRES1P49788 294 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 ATAT1Q5SQI0 421 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 EXOC8Q8IYI6 725 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 COLGALT2Q8IYK4 626 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 RIPOR3Q96MK2 946 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 MTMR9Q96QG7 549 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 IRAK3Q9Y616 596 aa12.97□□□□□ -0.33
VARS2-208ENST00000477052 CNTNAP2Q9UHC6 1331 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.33
VARS2-208ENST00000477052 MED24O75448 989 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 SPATA31C1P0DKV0 1188 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 AVPR2P30518 371 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 CLCN4P51793 760 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 TRIM29Q14134 588 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 MXD4Q14582 209 aaPredicted RBP12.96□□□□□ -0.33
VARS2-208ENST00000477052 ZNF174Q15697 407 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 KIAA1841Q6NSI8 718 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 NOTUMQ6P988 496 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 CCDC83Q8IWF9 413 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 TDRD5Q8NAT2 981 aaKnown RBP12.96□□□□□ -0.33
VARS2-208ENST00000477052 CCDC43Q96MW1 224 aaKnown RBP12.96□□□□□ -0.33
VARS2-208ENST00000477052 NECTIN4Q96NY8 510 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 TMEM175Q9BSA9 504 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 CSRNP2Q9H175 543 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 CXCL16Q9H2A7 254 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 ANKEF1Q9NU02 776 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 DZANK1Q9NVP4 752 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 PPME1Q9Y570 386 aa12.96□□□□□ -0.33
VARS2-208ENST00000477052 LRRIQ4A6NIV6 560 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 TEX28O15482 410 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 DGAT1O75907 488 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 LYPLA2O95372 231 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 LIG1P18858 919 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 TFDP1Q14186 410 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 NBR1Q14596 966 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 POTEGQ6S5H5 508 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 CATSPER3Q86XQ3 398 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 PALB2Q86YC2 1186 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 ST13P5Q8NFI4 369 aaPredicted RBP12.95□□□□□ -0.34
VARS2-208ENST00000477052 PAAF1Q9BRP4 392 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 EMILIN2Q9BXX0 1053 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 TRIM6Q9C030 488 aaPredicted RBP12.95□□□□□ -0.34
VARS2-208ENST00000477052 KCNH6Q9H252 994 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 MAN1C1Q9NR34 630 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 MRPL17Q9NRX2 175 aaKnown RBP12.95□□□□□ -0.34
VARS2-208ENST00000477052 KANSL3Q9P2N6 904 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 PARP2Q9UGN5 583 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 SORCS3Q9UPU3 1222 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 PLXNA3P51805 1871 aa12.95□□□□□ -0.34
VARS2-208ENST00000477052 C2orf16Q68DN1 1984 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 H0Y858 1186 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 RFPL2O75678 378 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 SOD2P04179 222 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 URODP06132 367 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 RPL17P18621 184 aaKnown RBP12.94□□□□□ -0.34
VARS2-208ENST00000477052 AXLP30530 894 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 DSC1Q08554 894 aa12.94□□□□□ -0.34
VARS2-208ENST00000477052 MTMR3Q13615 1198 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms