RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DHX32Q7L7V1 743 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 MRPL10Q7Z7H8 261 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 GPR161Q8N6U8 529 aaKnown RBP21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 HDAC7Q8WUI4 952 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 SLC5A5Q92911 643 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 RXFP1Q9HBX9 757 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 GPR179Q6PRD1 2367 aa21.25■□□□□ 0.99
NCKIPSD-209ENST00000470006 CCDC196A0A1B0GTZ2 297 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 ANHXE9PGG2 379 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 ATXN1P54253 815 aaKnown RBP21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 STARD6P59095 220 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 GPC5P78333 572 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 EXOSC10Q01780 885 aaKnown RBP21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 RDM1Q8NG50 284 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 PRKD2Q9BZL6 878 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 UBN1Q9NPG3 1134 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 ZDHHC7Q9NXF8 308 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 CDV3Q9UKY7 258 aaKnown RBP21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 COL4A3BPQ9Y5P4 624 aa21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 KMT2BQ9UMN6 2715 aaPredicted RBP21.24■□□□□ 0.99
NCKIPSD-209ENST00000470006 KANSL1LA0AUZ9 987 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 SPTLC1O15269 473 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 TGM5O43548 720 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 FSHRP23945 695 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 DSG1Q02413 1049 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 PLA2G4FQ68DD2 849 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 COLGALT2Q8IYK4 626 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 MAML2Q8IZL2 1156 aaPredicted RBP21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 B3GALT6Q96L58 329 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 CEP89Q96ST8 783 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 RPP25Q9BUL9 199 aaKnown RBP21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 IFT122Q9HBG6 1241 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 MYH15Q9Y2K3 1946 aa21.23■□□□□ 0.99
NCKIPSD-209ENST00000470006 USP11P51784 963 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 ZNF528Q3MIS6 628 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 CNNM3Q8NE01 707 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 BORCS6Q96GS4 357 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 GAD1Q99259 594 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 COLEC11Q9BWP8 271 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 FBXO4Q9UKT5 387 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 USP18Q9UMW8 372 aa21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 ZFP37Q9Y6Q3 630 aaPredicted RBP21.22■□□□□ 0.99
NCKIPSD-209ENST00000470006 FAM170BA6NMN3 283 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 STBD1O95210 358 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 NCLP19338 710 aaKnown RBP21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 MLH1P40692 756 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 UBXN11Q5T124 520 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 PARM1Q6UWI2 310 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 SRGAP1Q7Z6B7 1085 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 CCDC148Q8NFR7 591 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 PRPF31Q8WWY3 499 aaKnown RBP21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 SLC7A3Q8WY07 619 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 FGF14Q92915 247 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 APOL6Q9BWW8 343 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 PCDHGA2Q9Y5H1 932 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 TDRD15B5MCY1 1934 aaKnown RBP21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 DOCK6Q96HP0 2047 aa21.21■□□□□ 0.99
NCKIPSD-209ENST00000470006 DCDC2BA2VCK2 349 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 ARL5CA6NH57 179 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 PRR5-ARHGAP8B1AHC4 643 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 F8W810 466 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 PRPF3O43395 683 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 PSMD10O75832 226 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 ERLIN2O94905 339 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 RPL17P18621 184 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 HOXA11P31270 313 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 SCNN1GP51170 649 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 ARHGAP8P85298 464 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 LMNB2Q03252 620 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 MLF2Q15773 248 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 USP41Q3LFD5 358 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 SLC44A4Q53GD3 710 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 ANO5Q75V66 913 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 GRASPQ7Z6J2 395 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 PSPC1Q8WXF1 523 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 TMEM143Q96AN5 459 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 MINDY3Q9H8M7 445 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 BMP2KQ9NSY1 1161 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 POLIQ9UNA4 740 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 SMG5Q9UPR3 1016 aaKnown RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 MTF2Q9Y483 593 aaPredicted RBP21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 IPPQ9Y573 584 aa21.2■□□□□ 0.98
NCKIPSD-209ENST00000470006 RCAN1P53805 252 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 NPEPPSP55786 919 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 PSMC5P62195 406 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 PRKCQQ04759 706 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 MTSS1LQ765P7 747 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 SMG8Q8ND04 991 aaKnown RBP21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 CEP170P1Q96L14 293 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 SLKQ9H2G2 1235 aaPredicted RBP21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 RNF39Q9H2S5 420 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 CHST7Q9NS84 486 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 CDH7Q9ULB5 785 aa21.19■□□□□ 0.98
NCKIPSD-209ENST00000470006 ZMYND10O75800 440 aa21.18■□□□□ 0.98
NCKIPSD-209ENST00000470006 CD72P21854 359 aa21.18■□□□□ 0.98
NCKIPSD-209ENST00000470006 CREMQ03060 361 aa21.18■□□□□ 0.98
NCKIPSD-209ENST00000470006 NCBP1Q09161 790 aaKnown RBP21.18■□□□□ 0.98
NCKIPSD-209ENST00000470006 LAMTOR4Q0VGL1 99 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms