RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 LMNTD2Q8IXW0 634 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 SLC20A1Q8WUM9 679 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 C1orf54Q8WWF1 131 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 HAS1Q92839 578 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 PITPNM3Q9BZ71 974 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 CRNKL1Q9BZJ0 848 aaKnown RBP8.52□□□□□ -1.04
TPM3-215ENST00000469717 ALG6Q9Y672 507 aa8.52□□□□□ -1.04
TPM3-215ENST00000469717 CETN3O15182 167 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 KRT18P05783 430 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 SPATA31D3P0C874 917 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 PYGMP11217 842 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 CYP19A1P11511 503 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 GBP1P32455 592 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 WDR4P57081 412 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 EPHA7Q15375 998 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 TMEM63BQ5T3F8 832 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 SPATA31D4Q6ZUB0 917 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 INTS8Q75QN2 995 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 ZC3H18Q86VM9 953 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 DRAXINQ8NBI3 349 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 RFFLQ8WZ73 363 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 C6orf50Q9HD87 102 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 TNS2Q63HR2 1409 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 COL18A1P39060 1754 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 PHF2O75151 1096 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 COQ9O75208 318 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 KRT36O76013 467 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 UBTFL6P0CB48 400 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 ZCCHC18P0CG32 403 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 DLATP10515 647 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 XRCC5P13010 732 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 ALDH3A1P30838 453 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 MESDQ14696 234 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 DOK7Q18PE1 504 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 TMEM119Q4V9L6 283 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 EAPPQ56P03 285 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 ARSHQ5FYA8 562 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 CAPN12Q6ZSI9 719 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 TXNRD3Q86VQ6 643 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 SYCE1Q8N0S2 351 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 GBP7Q8N8V2 638 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 CTNNBL1Q8WYA6 563 aaPredicted RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 KIFAP3Q92845 792 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 GORASP1Q9BQQ3 440 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 NT5C3AQ9H0P0 336 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 MTRF1LQ9UGC7 380 aaKnown RBP8.52□□□□□ -1.05
TPM3-215ENST00000469717 GRID1Q9ULK0 1009 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 NUP98P52948 1817 aa8.52□□□□□ -1.05
TPM3-215ENST00000469717 FGFR1P11362 822 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 GCLCP48506 637 aaPredicted RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 SERPINB4P48594 390 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MRPS35P82673 323 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 R3HDM1Q15032 1099 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 GRIK5Q16478 980 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MTHFD1LQ6UB35 978 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 KIAA0825Q8IV33 1275 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 ZNF34Q8IZ26 560 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 ELMO3Q96BJ8 720 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 FAM136AQ96C01 138 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 C9orf72Q96LT7 481 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CEP63Q96MT8 703 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MIPEPQ99797 713 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TRIM7Q9C029 511 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CARD9Q9H257 536 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 C12orf65Q9H3J6 166 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 ZNF804BA4D1E1 1349 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 ARAP2Q8WZ64 1704 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 USP17L5A8MUK1 530 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 NPTXRO95502 500 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 PLA2G4BP0C869 781 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 RARGP13631 454 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CYP11B2P19099 503 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 PRKCIP41743 596 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 JAM2P57087 298 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 PABPC4Q13310 644 aaKnown RBP eCLIP8.51□□□□□ -1.052e-26■■■□□ 15.7
TPM3-215ENST00000469717 DRAP1Q14919 205 aaPredicted RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 TMEM266Q2M3C6 531 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 SFR1Q86XK3 245 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 KBTBD2Q8IY47 623 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 ARHGEF1Q92888 912 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 SLC35C1Q96A29 364 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 PRR11Q96HE9 360 aaPredicted RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 ATP9AO75110 1047 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TRIM49P0CI25 452 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TRIM49CP0CI26 452 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.052e-6■■■□□ 15.5
TPM3-215ENST00000469717 COG2Q14746 738 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 RCN1Q15293 331 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 MTFR1Q15390 333 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 VPS72Q15906 364 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 DAB2IPQ5VWQ8 1189 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 DGKHQ86XP1 1220 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 TGFBRAP1Q8WUH2 860 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 NYXQ9GZU5 481 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 LRMDAQ9H2I8 198 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 RGL1Q9NZL6 768 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
TPM3-215ENST00000469717 RPS6KL1Q9Y6S9 549 aa8.51□□□□□ -1.05
TPM3-215ENST00000469717 FAM187AA6NFU0 413 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms