RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 CNMDO75829 334 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 STAM2O75886 525 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 ME1P48163 572 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 HUNKP57058 714 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 SNAP25P60880 206 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 HERVK_113P62684 666 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 MAP7Q14244 749 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 ZNF174Q15697 407 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 MSMPQ1L6U9 139 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 CCDC174Q6PII3 467 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 OGFOD3Q6PK18 319 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 USP17L6PQ6QN14 398 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 GADL1Q6ZQY3 521 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 RBM43Q6ZSC3 357 aaKnown RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 FAM214BQ7L5A3 538 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 CCAR1Q8IX12 1150 aaKnown RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 SLFN12Q8IYM2 578 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 ABRAQ8N0Z2 381 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 CPXCR1Q8N123 301 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 FAM181AQ8N9Y4 354 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 RNF214Q8ND24 703 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 RASGRP4Q8TDF6 673 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 SYTL5Q8TDW5 730 aaPredicted RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 BRI3BPQ8WY22 251 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 TBC1D5Q92609 795 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 SYAP1Q96A49 352 aaPredicted RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 PLPPR2Q96GM1 343 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 FAM20AQ96MK3 541 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 FRMD6Q96NE9 622 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 IWS1Q96ST2 819 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 OSBPL1AQ9BXW6 950 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 SPATC1LQ9H0A9 340 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 ATXN3LQ9H3M9 355 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 MROH8Q9H579 483 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 ACAD9Q9H845 621 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 LRRC4CQ9HCJ2 640 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 DDX19AQ9NUU7 478 aaKnown RBP6.18□□□□□ -1.42
VPS41-211ENST00000466017 TMEM260Q9NX78 707 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 BTBD7Q9P203 1132 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 RIPK3Q9Y572 518 aa6.18□□□□□ -1.42
VPS41-211ENST00000466017 CCL15-CCL14A0A0B4J2E2 113 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 FAM155AB1AL88 458 aaPredicted RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 B4DLN1 442 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 BTBD19C9JJ37 291 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 PDHXO00330 501 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 MEIS1O00470 390 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 STRNO43815 780 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 NEMFO60524 1076 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CCNT1O60563 726 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 CFBP00751 764 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 OR52Z1P0C646 297 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 FAM87AP0C7U9 286 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 ALAS1P13196 640 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 MUTP22033 750 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 MCM7P33993 719 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 LIG3P49916 1009 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 ZNF445P59923 1031 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 RPS6P62753 249 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 ERVK-24P63145 666 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CCNA1P78396 465 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CEBPZQ03701 1054 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 FAM160A1Q05DH4 1040 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 SNW1Q13573 536 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 NKG7Q16617 165 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CCL15Q16663 113 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 UBE2SQ16763 222 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 LETM2Q2VYF4 491 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 USH1GQ495M9 461 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 MUM1L1Q5H9M0 696 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 HP1BP3Q5SSJ5 553 aaPredicted RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 ZBTB37Q5TC79 503 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 SHC4Q6S5L8 630 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 AGMOQ6ZNB7 445 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 RNF207Q6ZRF8 634 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 VSIG10LQ86VR7 867 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 DTX1Q86Y01 620 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 RASAL3Q86YV0 1011 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 WFDC3Q8IUB2 231 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 IGSF22Q8N9C0 903 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 MRPS27Q92552 414 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 HEXIM2Q96MH2 286 aaKnown RBP6.17□□□□□ -1.42
VPS41-211ENST00000466017 MXRA8Q9BRK3 442 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 RAB34Q9BZG1 259 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 FTOQ9C0B1 505 aaKnown RBP eCLIP6.17□□□□□ -1.42
VPS41-211ENST00000466017 TMEM60Q9H2L4 133 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 ZNF408Q9H9D4 720 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 KCNMB3Q9NPA1 279 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 RNF146Q9NTX7 359 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CYP39A1Q9NYL5 469 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 CYP8B1Q9UNU6 501 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 UBIAD1Q9Y5Z9 338 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 PFASO15067 1338 aa6.17□□□□□ -1.42
VPS41-211ENST00000466017 DNAJC25-GNG10A0A024R161 153 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 IGLV3-22A0A075B6J6 115 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 GFRA2O00451 464 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 NFIBO00712 420 aa6.16□□□□□ -1.42
VPS41-211ENST00000466017 ZNF202O95125 648 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms