RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 CHMP4BP1P59074 171 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 GSTM4Q03013 218 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 MVPQ14764 893 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SETDB1Q15047 1291 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TCEAL1Q15170 157 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 DUSP28Q4G0W2 176 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TMEM201Q5SNT2 666 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SLC4A10Q6U841 1118 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 Q6ZNB5 142 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ZNF662Q6ZS27 426 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 GK5Q6ZS86 529 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 KIAA1211Q6ZU35 1233 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TMEM179Q6ZVK1 233 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CYFIP1Q7L576 1253 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 MAP4K3Q8IVH8 894 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SPATA5Q8NB90 893 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 KLHL23Q8NBE8 558 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CHST13Q8NET6 341 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 DBF4BQ8NFT6 615 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 PPP1R13LQ8WUF5 828 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 P2RX5Q93086 422 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 NECTIN4Q96NY8 510 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CCDC86Q9H6F5 360 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TLE6Q9H808 572 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ERVK-5Q9HDB9 667 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 GPR108Q9NPR9 543 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 PDGFCQ9NRA1 345 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 ACTR10Q9NZ32 417 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 GMEB2Q9UKD1 530 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 PLAGL2Q9UPG8 496 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 SMG5Q9UPR3 1016 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TMX2Q9Y320 296 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 RIPK3Q9Y572 518 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 CTDP1Q9Y5B0 961 aaPredicted RBP4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 C2orf16Q68DN1 1984 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 MYO9AB2RTY4 2548 aa4.81□□□□□ -1.64
ECHDC1-211ENST00000460558 TICRRQ7Z2Z1 1910 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ADGRA3Q8IWK6 1321 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 FNDC1Q4ZHG4 1894 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 LINC01387J3KSC0 135 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ATP2A1O14983 1001 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 OIP5O43482 229 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ZNF862O60290 1169 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 HTR3BO95264 441 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 NID1P14543 1247 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 HOXB8P17481 243 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 NCLP19338 710 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ARL4DP49703 201 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 PLCD1P51178 756 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CNTN2Q02246 1040 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ICA1Q05084 483 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CAMK1Q14012 370 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 WDR43Q15061 677 aaKnown RBP eCLIP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 POU4F3Q15319 338 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 SOWAHCQ53LP3 525 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TMEM63BQ5T3F8 832 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 N4BP2L1Q5TBK1 243 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TAPT1Q6NXT6 567 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 LRFN4Q6PJG9 635 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CHSY3Q70JA7 882 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 EEPD1Q7L9B9 569 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 SESTD1Q86VW0 696 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CERS3Q8IU89 383 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 C1orf210Q8IVY1 113 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 FBXO16Q8IX29 292 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CPXCR1Q8N123 301 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TDRD5Q8NAT2 981 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 OR6J1Q8NGC5 347 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ATP8B4Q8TF62 1192 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TMEM40Q8WWA1 233 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ATRIPQ8WXE1 791 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 SEPT8Q92599 483 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TSR2Q969E8 191 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CTAGE1Q96RT6 745 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 SRPK1Q96SB4 655 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 CDCA3Q99618 268 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TM9SF2Q99805 663 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 SLF1Q9BQI6 1058 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 TNKS2Q9H2K2 1166 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 HMG20BQ9P0W2 317 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 ABCA12Q86UK0 2595 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 AKAP13Q12802 2813 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 DMXL2Q8TDJ6 3036 aa4.8□□□□□ -1.64
ECHDC1-211ENST00000460558 APC2O95996 2303 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 TENM4Q6N022 2769 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 M0R082 166 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 ZBED4O75132 1171 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 ITGB1P05556 798 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 LINC00271P0C7V0 271 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 ARP10275 920 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 HOXB4P17483 251 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 TGM1P22735 817 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 MAOBP27338 520 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 IL15P40933 162 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 TECP42680 631 aa4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 RFX5P48382 616 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 BTG3Q14201 252 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-211ENST00000460558 INPP5AQ14642 412 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms