RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NAP1L3Q99457 506 aaPredicted RBP21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZSWIM1Q9BR11 485 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 TXLNGYQ9BZA5 131 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 TOPORSQ9NS56 1045 aaPredicted RBP21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 FRMPD4Q14CM0 1322 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 ATXN2Q99700 1313 aaKnown RBP21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 PTGIRP43119 386 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 VAMP7P51809 220 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TNIP1Q15025 636 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZKSCAN8Q15776 578 aaPredicted RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 CEP55Q53EZ4 464 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 PARP9Q8IXQ6 854 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 LMO3Q8TAP4 145 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 NACC1Q96RE7 527 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 NUP85Q9BW27 656 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TRIM7Q9C029 511 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TBK1Q9UHD2 729 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TPX2Q9ULW0 747 aaKnown RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TRPC6Q9Y210 931 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 IPO5O00410 1097 aaKnown RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 CLTAP09496 248 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 SWT1Q5T5J6 900 aaKnown RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 TBC1D1Q86TI0 1168 aaPredicted RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 GDAP1Q8TB36 358 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 PRMT6Q96LA8 375 aaPredicted RBP21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 RARAP10276 462 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 GJC1P36383 396 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 GPC5P78333 572 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 FAM228AQ86W67 206 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZNF653Q96CK0 615 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 SUGT1Q9Y2Z0 365 aa21.06■□□□□ 0.96
CNEP1R1-203ENST00000458059 SLC16A4O15374 487 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 CCDC172P0C7W6 258 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 SNCBQ16143 134 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 TUFT1Q9NNX1 390 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 KCNK9Q9NPC2 374 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 CCDC169A6NNP5 214 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 PRUNE1Q86TP1 453 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 CCT6BQ92526 530 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 MYCBPQ99417 103 aaPredicted RBP21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 GLIS2Q9BZE0 524 aaPredicted RBP21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 DMAC2Q9NW81 257 aa21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 MTRF1LQ9UGC7 380 aaKnown RBP21.05■□□□□ 0.96
CNEP1R1-203ENST00000458059 RASGRF2O14827 1237 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 RPSAP08865 295 aaKnown RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ANXA13P27216 316 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 EIF3BP55884 814 aaKnown RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 TATDN1Q6P1N9 297 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 STXBP4Q6ZWJ1 553 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 CPXCR1Q8N123 301 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZNF564Q8TBZ8 553 aaPredicted RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ATXN2LQ8WWM7 1075 aaKnown RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 THOC1Q96FV9 657 aaKnown RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 WDR11Q9BZH6 1224 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ABCF3Q9NUQ8 709 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ASIC3Q9UHC3 531 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 SYNGAP1Q96PV0 1343 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 CHUKO15111 745 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 ECE2O60344 883 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 SORBS3O60504 671 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 SOX10P56693 466 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 KIF22Q14807 665 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 CBWD2Q8IUF1 395 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 IL31RAQ8NI17 732 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 GMCL1Q96IK5 515 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 PI4K2AQ9BTU6 479 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 TTC7AQ9ULT0 858 aaPredicted RBP21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 USP20Q9Y2K6 914 aa21.04■□□□□ 0.96
CNEP1R1-203ENST00000458059 PEX3P56589 373 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 RHOT2Q8IXI1 618 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZNF317Q96PQ6 595 aaPredicted RBP21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 MKNK1Q9BUB5 465 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 ADAM33Q9BZ11 813 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 CHRNB2P17787 502 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 ADRA2BP18089 450 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 MXI1P50539 228 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 DHX34Q14147 1143 aaKnown RBP21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 AOC3Q16853 763 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 SLC5A5Q92911 643 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 HEMGNQ9BXL5 484 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 CNOT10Q9H9A5 744 aaKnown RBP21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 ACTR5Q9H9F9 607 aaPredicted RBP21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 FAM187AA6NFU0 413 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 RIPK2O43353 540 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 MIER3Q7Z3K6 550 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 EPS8L1Q8TE68 723 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 SEMA4DQ92854 862 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 AGBL1Q96MI9 1066 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 KREMEN1Q96MU8 473 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 TEKT3Q9BXF9 490 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 HSPBP1Q9NZL4 362 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 SAMD15Q9P1V8 674 aa21.03■□□□□ 0.96
CNEP1R1-203ENST00000458059 C5orf60A6NFR6 353 aa21.02■□□□□ 0.96
CNEP1R1-203ENST00000458059 CCT8L1PA6NM43 557 aa21.02■□□□□ 0.96
CNEP1R1-203ENST00000458059 ADRB2P07550 413 aa21.02■□□□□ 0.96
CNEP1R1-203ENST00000458059 PAEPP09466 180 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms