RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 UBE2SQ16763 222 aa18.43■□□□□ 0.54
SCUBE2-202ENST00000450649 SEPT11Q9NVA2 429 aaKnown RBP18.43■□□□□ 0.54
SCUBE2-202ENST00000450649 USP40Q9NVE5 1235 aa18.43■□□□□ 0.54
SCUBE2-202ENST00000450649 INTS8Q75QN2 995 aaKnown RBP18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 VSIG1Q86XK7 387 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 FAM13CQ8NE31 585 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 NUDCD1Q96RS6 583 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 METTL14Q9HCE5 456 aaKnown RBP18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 CD209Q9NNX6 404 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 CALUO43852 315 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 DRAP1Q14919 205 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 UBL4BQ8N7F7 174 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 MAGEB18Q96M61 343 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 GPR101Q96P66 508 aaPredicted RBP18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 JMJD4Q9H9V9 463 aa18.42■□□□□ 0.54
SCUBE2-202ENST00000450649 TCRBV7S2A1N4TA0A589 114 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 IRF6O14896 467 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 NR3C1P04150 777 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 KCNJ1P48048 391 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 LBRQ14739 615 aaKnown RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 PALB2Q86YC2 1186 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 AGGF1Q8N302 714 aaeCLIP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 SYT11Q9BT88 431 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 ASB3Q9Y575 518 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 TMEM110-MUSTN1A8MSY1 372 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 PDXKO00764 312 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 SLC26A4O43511 780 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 RTN3O95197 1032 aaPredicted RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 TTLL1O95922 423 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 TARSP26639 723 aaKnown RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 COILP38432 576 aaPredicted RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 CTTNQ14247 550 aaKnown RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 SGSM1Q2NKQ1 1148 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 CMPK2Q5EBM0 449 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 TMEM154Q6P9G4 183 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 FAM47EQ6ZV65 393 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 SFR1Q86XK3 245 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 SLF2Q8IX21 1173 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 LRRC47Q8N1G4 583 aaKnown RBP18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 GALNT15Q8N3T1 639 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 ERP27Q96DN0 273 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 PITPNM3Q9BZ71 974 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 HAO1Q9UJM8 370 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 PCDHB13Q9Y5F0 798 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 GAKO14976 1311 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 PASKQ96RG2 1323 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
SCUBE2-202ENST00000450649 ANKRD62A6NC57 917 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 MIF4GDA9UHW6 222 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 H0Y3Z8 333 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 GNPATO15228 680 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 TNFAIP3P21580 790 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 SLC12A3P55017 1021 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 KLC1Q07866 573 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ADCY1Q08828 1119 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ZNF543Q08ER8 600 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 CALCOCO2Q13137 446 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 SEPT14Q6ZU15 432 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ASAP3Q8TDY4 903 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 RPS6KC1Q96S38 1066 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 STK33Q9BYT3 514 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 DHX36Q9H2U1 1008 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 AAASQ9NRG9 546 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 DNAJC12Q9UKB3 198 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 C2CD2Q9Y426 696 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 IGKV6D-41A0A0C4DH26 115 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 GTPBP10A4D1E9 387 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 CLIC2O15247 247 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 PPP1R11O60927 126 aaPredicted RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 IL1R1P14778 569 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 TAC1P20366 129 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 PTDSS1P48651 473 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ADGRF4Q8IZF3 695 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 GRAMD1AQ96CP6 724 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ZSWIM1Q9BR11 485 aa18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
SCUBE2-202ENST00000450649 ATP5HO75947 161 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 CNGA1P29973 690 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 FOXN2P32314 431 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 GCLCP48506 637 aaPredicted RBP18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 SETDB1Q15047 1291 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 SEL1L2Q5TEA6 688 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 ARHGEF18Q6ZSZ5 1173 aa18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 APLFQ8IW19 511 aaPredicted RBP18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 ENDOVQ8N8Q3 282 aaKnown RBP18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 POP1Q99575 1024 aaKnown RBP18.39■□□□□ 0.54
SCUBE2-202ENST00000450649 POTEFA5A3E0 1075 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 POTEIP0CG38 1075 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 ACADSP16219 412 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 GABPAQ06546 454 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 GIT2Q14161 759 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 TNIP1Q15025 636 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 PPP1R15BQ5SWA1 713 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 POTEGQ6S5H5 508 aa18.39■□□□□ 0.53
SCUBE2-202ENST00000450649 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms