RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 CENPHQ9H3R5 247 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 DBR1Q9UK59 544 aaKnown RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 SPDYE16A6NNV3 312 aaPredicted RBP16■□□□□ 0.15
SF1-211ENST00000448404 EDN1P05305 212 aa16■□□□□ 0.15
SF1-211ENST00000448404 CHRNB2P17787 502 aa16■□□□□ 0.15
SF1-211ENST00000448404 ATP1A2P50993 1020 aa16■□□□□ 0.15
SF1-211ENST00000448404 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
SF1-211ENST00000448404 MESDQ14696 234 aa16■□□□□ 0.15
SF1-211ENST00000448404 TTMPQ5BVD1 217 aa16■□□□□ 0.15
SF1-211ENST00000448404 KCND2Q9NZV8 630 aa16■□□□□ 0.15
SF1-211ENST00000448404 CTTNBP2NLQ9P2B4 639 aa16■□□□□ 0.15
SF1-211ENST00000448404 ADM5C9JUS6 153 aa16■□□□□ 0.15
SF1-211ENST00000448404 DAPK3O43293 454 aa16■□□□□ 0.15
SF1-211ENST00000448404 STBD1O95210 358 aa16■□□□□ 0.15
SF1-211ENST00000448404 DSG3P32926 999 aa16■□□□□ 0.15
SF1-211ENST00000448404 PPP2R5AQ15172 486 aa16■□□□□ 0.15
SF1-211ENST00000448404 ZSCAN26Q16670 478 aa16■□□□□ 0.15
SF1-211ENST00000448404 INTS8Q75QN2 995 aaKnown RBP16■□□□□ 0.15
SF1-211ENST00000448404 PAGR1Q9BTK6 254 aa16■□□□□ 0.15
SF1-211ENST00000448404 STXBP5LQ9Y2K9 1186 aa16■□□□□ 0.15
SF1-211ENST00000448404 TCRBV7S2A1N4TA0A589 114 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 FZD9O00144 591 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 DDNO94850 711 aaPredicted RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 CFHP08603 1231 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 ATP4AP20648 1035 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 CCND2P30279 289 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 UBAP2Q5T6F2 1119 aaKnown RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 TMEM206Q9H813 350 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 JPH1Q9HDC5 661 aaPredicted RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 COL11A1P12107 1806 aaPredicted RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 PTPRJQ12913 1337 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 POLR2AP24928 1970 aaKnown RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 MARK3P27448 753 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 NF2P35240 595 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 TRIM50Q86XT4 487 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 SLC16A10Q8TF71 515 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 POLR3FQ9H1D9 316 aaPredicted RBP15.99■□□□□ 0.15
SF1-211ENST00000448404 FBXL5Q9UKA1 691 aa15.99■□□□□ 0.15
SF1-211ENST00000448404 MYO1CO00159 1063 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 KRT5P13647 590 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 NCKAP1LP55160 1127 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 CDR2LQ86X02 465 aaPredicted RBP15.98■□□□□ 0.15
SF1-211ENST00000448404 SLC9A9Q8IVB4 645 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 NEK9Q8TD19 979 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 EPS8L1Q8TE68 723 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 PARD3BQ8TEW8 1205 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 EXOC4Q96A65 974 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 HAPLN2Q9GZV7 340 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 GDF3Q9NR23 364 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ANKFY1Q9P2R3 1169 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ECHS1P30084 290 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 AARSP49588 968 aaKnown RBP eCLIP15.98■□□□□ 0.15
SF1-211ENST00000448404 EPHB4P54760 987 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 KRT76Q01546 638 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 SV2AQ7L0J3 742 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ZDHHC14Q8IZN3 488 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 NSUN6Q8TEA1 469 aaKnown RBP15.98■□□□□ 0.15
SF1-211ENST00000448404 AFAP1L1Q8TED9 768 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 RFFLQ8WZ73 363 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ZNF516Q92618 1163 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 CLMNQ96JQ2 1002 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 AMFRQ9UKV5 643 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 KIAA1217Q5T5P2 1943 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 GOLGA6CA6NDK9 693 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ZNF233A6NK53 670 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 PGRMC1O00264 195 aaKnown RBP15.98■□□□□ 0.15
SF1-211ENST00000448404 DDX3YO15523 660 aaKnown RBP15.98■□□□□ 0.15
SF1-211ENST00000448404 PGK2P07205 417 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 GOLGA6DP0CG33 693 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 LMNB1P20700 586 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 NLRP11P59045 1033 aaKnown RBP15.98■□□□□ 0.15
SF1-211ENST00000448404 NFIL3Q16649 462 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 NIPA1Q7RTP0 329 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 IFT20Q8IY31 132 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ANKRD35Q8N283 1001 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 PIK3R5Q8WYR1 880 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 GOLGA6AQ9NYA3 693 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 BTBD7Q9P203 1132 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 TMEM59LQ9UK28 342 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 ALG6Q9Y672 507 aa15.98■□□□□ 0.15
SF1-211ENST00000448404 GJB6O95452 261 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 TUBBP07437 444 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 GJB1P08034 283 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 MCM3P25205 808 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 JAK3P52333 1124 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 ITIH3Q06033 890 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 VGLL4Q14135 290 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 SLFN11Q7Z7L1 901 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 PASD1Q8IV76 773 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 GOLGA5Q8TBA6 731 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 ASAP3Q8TDY4 903 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 HES6Q96HZ4 224 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.153e-7■■■□□ 15.6
SF1-211ENST00000448404 TEX13BQ9BXU2 312 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 SSC5DA1L4H1 1573 aa15.97■□□□□ 0.15
SF1-211ENST00000448404 LRRIQ4A6NIV6 560 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms