RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	SLC37A4	O43826	429 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	KPNA6	O60684	536 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ARIH2	O95376	493 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SGPL1	O95470	568 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PGK1	P00558	417 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	GJB1	P08034	283 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MYL3	P08590	195 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	UBA1	P22314	1058 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CASQ1	P31415	396 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TXK	P42681	527 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SERPINB4	P48594	390 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PLAUR	Q03405	335 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CEBPZ	Q03701	1054 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ZNF211	Q13398	564 aa	Predicted RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	STK38	Q15208	465 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	HSP90B2P	Q58FF3	399 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CELF3	Q5SZQ8	465 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ATL3	Q6DD88	541 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SDE2	Q6IQ49	451 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MIS18BP1	Q6P0N0	1132 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CCDC62	Q6P9F0	684 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ELMSAN1	Q6PJG2	1045 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	METTL7B	Q6UX53	244 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CYFIP1	Q7L576	1253 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MIER3	Q7Z3K6	550 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TTC30B	Q8N4P2	665 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PCSK9	Q8NBP7	692 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TTC16	Q8NEE8	873 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	U2AF1L4	Q8WU68	220 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SEPT1	Q8WYJ6	367 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	RSPH1	Q8WYR4	309 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	EDEM1	Q92611	657 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	COPS5	Q92905	334 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MBOAT7	Q96N66	472 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	UIMC1	Q96RL1	719 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	RIT2	Q99578	217 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	RAB34	Q9BZG1	259 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SLC9A2	Q9UBY0	812 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	NAGPA	Q9UK23	515 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PCDHA12	Q9UN75	941 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	GNE	Q9Y223	722 aa	Known RBP	6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PCDHB6	Q9Y5E3	794 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	LCT	P09848	1927 aa		6.88	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ELP1	O95163	1332 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	KRBA1	A5PL33	1030 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638		J3QW42	95 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PES1	O00541	588 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CHMP2A	O43633	222 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	DKC1	O60832	514 aa	Known RBP eCLIP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ATP9A	O75110	1047 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	FARP2	O94887	1054 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	KCNA2	P16389	499 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PCSK2	P16519	638 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SFN	P31947	248 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	EIF1AX	P47813	144 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	GJA8	P48165	433 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CD151	P48509	253 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TOB1	P50616	345 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	JAK3	P52333	1124 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	NRL	P54845	237 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	GJA9	P57773	515 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	KRT85	P78386	507 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	GPLD1	P80108	840 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ARHGAP1	Q07960	439 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PSMD2	Q13200	908 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PKP1	Q13835	747 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	FSCN1	Q16658	493 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	DGKD	Q16760	1214 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PLA2G4E	Q3MJ16	856 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PERM1	Q5SV97	790 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	FAM160B1	Q5W0V3	765 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	NCAPH2	Q6IBW4	605 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ZNF746	Q6NUN9	644 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	FAM173B	Q6P4H8	233 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	DTHD1	Q6ZMT9	781 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ALYREF	Q86V81	257 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ZSCAN30	Q86W11	494 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PPTC7	Q8NI37	304 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	AFG1L	Q8WV93	481 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	SLC5A5	Q92911	643 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TNPO1	Q92973	898 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	LENG1	Q96BZ8	264 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	ABHD8	Q96I13	439 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	NSUN5	Q96P11	429 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CCDC94	Q9BW85	323 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	UPF3A	Q9H1J1	476 aa	Known RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	AZI2	Q9H6S1	392 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	TTC12	Q9H892	705 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PAK6	Q9NQU5	681 aa	Predicted RBP	6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	PRDM6	Q9NQX0	595 aa		6.87	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MCM3AP	O60318	1980 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	MYH7B	A7E2Y1	1941 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	WDR64	B1ANS9	1081 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	DNM1L	O00429	736 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	EDIL3	O43854	480 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	COQ9	O75208	318 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	CABYR	O75952	493 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	FAM13A	O94988	1023 aa		6.86	□□□□□ -1.31
ECHDC1-208	ENST00000436638	YEATS4	O95619	227 aa		6.86	□□□□□ -1.31

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