RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 SH3BGRL2Q9UJC5 107 aa6.06□□□□□ -1.44
RFC3-202ENST00000434425 GGA1Q9UJY5 639 aa6.06□□□□□ -1.44
RFC3-202ENST00000434425 FZD1Q9UP38 647 aa6.06□□□□□ -1.44
RFC3-202ENST00000434425 CRYL1Q9Y2S2 319 aa6.06□□□□□ -1.44
RFC3-202ENST00000434425 R3HCC1Q9Y3T6 440 aaKnown RBP6.06□□□□□ -1.44
RFC3-202ENST00000434425 PITPNM2Q9BZ72 1349 aa6.06□□□□□ -1.44
RFC3-202ENST00000434425 PAPPA2Q9BXP8 1791 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 TRIOBPQ9H2D6 2365 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 WNT10BO00744 389 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 ERC2O15083 957 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 AHCYL1O43865 530 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 USO1O60763 962 aaKnown RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 FKTNO75072 461 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 TMEM127O75204 238 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 FRAT2O75474 233 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 BAG4O95429 457 aaKnown RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 AKR1B1P15121 316 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 ZKSCAN1P17029 563 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 MPSTP25325 297 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 TNNT3P45378 269 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 CLCN2P51788 898 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 EPHA4P54764 986 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 SLC12A2P55011 1212 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 GBE1Q04446 702 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 PPP2R3AQ06190 1150 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 PPA1Q15181 289 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 BMP2KLQ5H9B9 411 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 HABP4Q5JVS0 413 aaKnown RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 EPM2AIP1Q7L775 607 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 TMEM110Q86TL2 294 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 VSIG1Q86XK7 387 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 ZBTB38Q8NAP3 1195 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 RASSF8Q8NHQ8 419 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 CCT6BQ92526 530 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 FATE1Q969F0 183 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 MRGPRX2Q96LB1 330 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 TREX2Q9BQ50 279 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 SPON2Q9BUD6 331 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 CRB3Q9BUF7 120 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 TEX13BQ9BXU2 312 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 API5Q9BZZ5 524 aaKnown RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 TSPAN10Q9H1Z9 355 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 ZWILCHQ9H900 591 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 VPS37BQ9H9H4 285 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 RSAD1Q9HA92 442 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.05□□□□□ -1.44
RFC3-202ENST00000434425 RRAGDQ9NQL2 400 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 PRDM5Q9NQX1 630 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 PDLIM7Q9NR12 457 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 RAB6BQ9NRW1 208 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 SIRT5Q9NXA8 310 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 PPP1R14DQ9NXH3 145 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 DBF4Q9UBU7 674 aaPredicted RBP6.05□□□□□ -1.44
RFC3-202ENST00000434425 RIMKLBQ9ULI2 386 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 MAPK8IP1Q9UQF2 711 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 SSX2IPQ9Y2D8 614 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 PTPN22Q9Y2R2 807 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 KIF3AQ9Y496 699 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 LAMA3Q16787 3333 aa6.05□□□□□ -1.44
RFC3-202ENST00000434425 CCDC69A6NI79 296 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 AP3B1O00203 1094 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 SMAD7O15105 426 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 GPR39O43194 453 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 SART1O43290 800 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 STX6O43752 255 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 DAB1O75553 588 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 SLITRK3O94933 977 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 MAP3K6O95382 1288 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CD2BP2O95400 341 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 MCM4P33991 863 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 IL1RL1Q01638 556 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 PPFIA1Q13136 1202 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 COL9A2Q14055 689 aaPredicted RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 NEDD9Q14511 834 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 INAQ16352 499 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 PPP2R5EQ16537 467 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 KIAA0753Q2KHM9 967 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 TTC39AQ5SRH9 613 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 TPGS2Q68CL5 300 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 POMZP3Q6PJE2 187 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 ANGPTL8Q6UXH0 198 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CCDC81Q6ZN84 652 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CHD1LQ86WJ1 897 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CCDC26Q8TAB7 109 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 PPP1R14CQ8TAE6 165 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CCHCR1Q8TD31 782 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 DENND1AQ8TEH3 1009 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 SCG3Q8WXD2 468 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 CTNNBL1Q8WYA6 563 aaPredicted RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 KIF1BPQ96EK5 621 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 SGCZQ96LD1 299 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 CEP295NLQ96MC4 621 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 TIGD1Q96MW7 591 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 JAKMIP1Q96N16 626 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 TTLL2Q9BWV7 592 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 VCX3BQ9H321 246 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 MROH8Q9H579 483 aa6.04□□□□□ -1.44
RFC3-202ENST00000434425 PHAXQ9H814 394 aaKnown RBP6.04□□□□□ -1.44
RFC3-202ENST00000434425 OSGEPQ9NPF4 335 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms