RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SERINC2Q96SA4 455 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 TXLNGYQ9BZA5 131 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 SEMA6BQ9H3T3 888 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 KCNMB3Q9NPA1 279 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 AIPL1Q9NZN9 384 aa8.72□□□□□ -1.01
VTI1A-202ENST00000432306 TTC7AQ9ULT0 858 aaPredicted RBP8.72□□□□□ -1.01
VTI1A-202ENST00000432306 TRAF5O00463 557 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 IRS4O14654 1257 aaPredicted RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 LIN7AO14910 233 aaPredicted RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ASAP2O43150 1006 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 KLF4O43474 513 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 RAD51CO43502 376 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 FAM13AO94988 1023 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 CELF2O95319 508 aaKnown RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 DRD4P21917 467 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 KIF5BP33176 963 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 USP11P51784 963 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ERVK-9P63128 1117 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ICA1Q05084 483 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 WASHC5Q12768 1159 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 NOGQ13253 232 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ZNF268Q14587 947 aaPredicted RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ERMARDQ5T6L9 678 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 UNC13DQ70J99 1090 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ZC3H3Q8IXZ2 948 aaKnown RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 STAG2Q8N3U4 1231 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ANKRD42Q8N9B4 389 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 DMRTB1Q96MA1 342 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ANKRD27Q96NW4 1050 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 SLITRK6Q9H5Y7 841 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 ADARB2Q9NS39 739 aaKnown RBP8.71□□□□□ -1.01
VTI1A-202ENST00000432306 STK17AQ9UEE5 414 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 PCDHB3Q9Y5E6 796 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 MYH3P11055 1940 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 MYH6P13533 1939 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 FAM205AQ6ZU69 1335 aa8.71□□□□□ -1.01
VTI1A-202ENST00000432306 SNED1Q8TER0 1413 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 MYH2Q9UKX2 1941 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 POLR2AP24928 1970 aaKnown RBP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 PES1O00541 588 aaKnown RBP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 TLR2O60603 784 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NUDT17P0C025 328 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NPR3P17342 541 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 POU3F3P20264 500 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 GNA15P30679 374 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 CXCR5P32302 372 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 GNAQP50148 359 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 GPSM2P81274 684 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 KCNMA1Q12791 1236 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 GRIK3Q13003 919 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 TOMM20Q15388 145 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 KIAA0753Q2KHM9 967 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 SPRED3Q2MJR0 410 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 ZCWPW2Q504Y3 356 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 SBK1Q52WX2 424 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 CIAPIN1Q6FI81 312 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 BRICD5Q6PL45 260 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 PIGWQ7Z7B1 504 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 CROCCP2Q86T23 111 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 SCUBE3Q8IX30 993 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NIM1KQ8IY84 436 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 RASSF8Q8NHQ8 419 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 RASGRP4Q8TDF6 673 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 THAP11Q96EK4 314 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 ZNF317Q96PQ6 595 aaPredicted RBP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 TMEM60Q9H2L4 133 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 RABEP2Q9H5N1 569 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 SMARCAL1Q9NZC9 954 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 EHD2Q9NZN4 543 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NENFQ9UMX5 172 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NIP7Q9Y221 180 aaKnown RBP eCLIP8.71□□□□□ -1.02
VTI1A-202ENST00000432306 ATP6V0A2Q9Y487 856 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 NUP98P52948 1817 aa8.71□□□□□ -1.02
VTI1A-202ENST00000432306 TNRC18O15417 2968 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 A0A0A6YYK5 440 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 MAGEB6P1A0A0J9YX57 407 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 ZSCAN5CA6NGD5 496 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 F8W031 263 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 ZBTB24O43167 697 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 NCK2O43639 380 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PALMO75781 387 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 ATP6V1G2O95670 118 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PLCG1P19174 1290 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 SLC1A4P43007 532 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 MATR3P43243 847 aaKnown RBP eCLIP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 CCNG1P51959 295 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 NPEPPSP55786 919 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 ELF3P78545 371 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 GFPT1Q06210 699 aaPredicted RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 SEPT2Q15019 361 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 IFI16Q16666 785 aaKnown RBP8.7□□□□□ -1.02
VTI1A-202ENST00000432306 THSD4Q6ZMP0 1018 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 RRAGAQ7L523 313 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 SLFN11Q7Z7L1 901 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 DGKHQ86XP1 1220 aa8.7□□□□□ -1.02
VTI1A-202ENST00000432306 ANKRD13BQ86YJ7 626 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms