RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 APOL6Q9BWW8 343 aa21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 VN1R3Q9BXE9 311 aa21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 TRIM6Q9C030 488 aaPredicted RBP21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 UBN1Q9NPG3 1134 aa21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 FAN1Q9Y2M0 1017 aa21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 PCDHB6Q9Y5E3 794 aa21.15■□□□□ 0.98
AL954642.1-201ENST00000428088 ARHGEF35A5YM69 484 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 ARL5CA6NH57 179 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 CD2BP2O95400 341 aaKnown RBP21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 CTSAP10619 480 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 CCT6AP40227 531 aaKnown RBP21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 MLH1P40692 756 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 FXR2P51116 673 aaKnown RBP eCLIP21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 PTGDRQ13258 359 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 HAUS3Q68CZ6 603 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 CASP10Q92851 521 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 GAD1Q99259 594 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 TMEM175Q9BSA9 504 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 MIOSQ9NXC5 875 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 LRWD1Q9UFC0 647 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 MUTYHQ9UIF7 546 aa21.14■□□□□ 0.97
AL954642.1-201ENST00000428088 NRP1O14786 923 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 NPTXRO95502 500 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 TMEM87AQ8NBN3 555 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 BSNDQ8WZ55 320 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 TMX3Q96JJ7 454 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 RPGRIP1Q96KN7 1286 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 ZFP42Q96MM3 310 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 PHF7Q9BWX1 381 aaPredicted RBP21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 NXF3Q9H4D5 531 aaKnown RBP21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 POLD4Q9HCU8 107 aa21.13■□□□□ 0.97
AL954642.1-201ENST00000428088 A0A1B0GUA9 196 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 LOC730098B7Z3J9 87 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 CYP11B2P19099 503 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 MUTP22033 750 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 AKAP5P24588 427 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 SCNN1GP51170 649 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 CBX2Q14781 532 aaPredicted RBP21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 CDCA2Q69YH5 1023 aaPredicted RBP21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 MCTP1Q6DN14 999 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 SLC27A1Q6PCB7 646 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 ZBTB8OSQ8IWT0 167 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 COLGALT2Q8IYK4 626 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 UPF2Q9HAU5 1272 aaKnown RBP21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 CDH22Q9UJ99 828 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 KIAA1024Q9UPX6 916 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 GIT1Q9Y2X7 761 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 IRAK3Q9Y616 596 aa21.12■□□□□ 0.97
AL954642.1-201ENST00000428088 PRR33A8MZF0 331 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 SSBP05455 408 aaKnown RBP eCLIP21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 OR1G1P47890 313 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 GIT2Q14161 759 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 PDIA5Q14554 519 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 BHMT2Q9H2M3 363 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 FZD8Q9H461 694 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 DDX19AQ9NUU7 478 aaKnown RBP21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 PRMT7Q9NVM4 692 aaPredicted RBP21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 PRG3Q9Y2Y8 225 aaPredicted RBP21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 KIF3AQ9Y496 699 aa21.11■□□□□ 0.97
AL954642.1-201ENST00000428088 TTLL13PA6NNM8 815 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 INPPL1O15357 1258 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 EPCAMP16422 314 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 GJB2P29033 226 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 PTPN14Q15678 1187 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 IL17AQ16552 155 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 TPRNQ4KMQ1 711 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 HERC4Q5GLZ8 1057 aaPredicted RBP21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 PPP4R3CPQ6ZMV5 832 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 HACE1Q8IYU2 909 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 IGSF22Q8N9C0 903 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 SNX29Q8TEQ0 813 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 PRIMPOLQ96LW4 560 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 C2orf40Q9H1Z8 148 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 MARCH5Q9NX47 278 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 KLK14Q9P0G3 267 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 PARP2Q9UGN5 583 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 USP20Q9Y2K6 914 aa21.1■□□□□ 0.97
AL954642.1-201ENST00000428088 PP2D1A8MPX8 630 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 LIG1P18858 919 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 DSC1Q08554 894 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 FAM187BQ17R55 369 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 TAS1R1Q7RTX1 841 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 C12orf76Q8N812 135 aaPredicted RBP21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 GSTCDQ8NEC7 633 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 DEPTORQ8TB45 409 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.09■□□□□ 0.97
AL954642.1-201ENST00000428088 PRKCBP05771 671 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 SP100P23497 879 aaPredicted RBP21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 CDC25AP30304 524 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 NAMPTP43490 491 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 TMEM132AQ24JP5 1023 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 RARS2Q5T160 578 aaKnown RBP21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 CES5AQ6NT32 575 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 KANK3Q6NY19 840 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 DTHD1Q6ZMT9 781 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 SLC22A17Q8WUG5 538 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 KIFC3Q9BVG8 833 aa21.08■□□□□ 0.97
AL954642.1-201ENST00000428088 ADAM7Q9H2U9 754 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms