RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 PTCH1Q13635 1447 aa8.08□□□□□ -1.12
HMGB1P32-201ENST00000425971 NCOA3Q9Y6Q9 1424 aa8.08□□□□□ -1.12
HMGB1P32-201ENST00000425971 FMN1Q68DA7 1419 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 MAFGO15525 162 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 CUTAO60888 179 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 SEC24DO94855 1032 aaPredicted RBP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 MYL1P05976 194 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 POU2F2P09086 479 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 GLRBP48167 497 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 NCKAP1LP55160 1127 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 CDK17Q00537 523 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 ADRM1Q16186 407 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 ATAT1Q5SQI0 421 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 LILRA6Q6PI73 481 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 MPZL3Q6UWV2 235 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 GAREM2Q75VX8 874 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 CXXC5Q7LFL8 322 aaKnown RBP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 IGDCC3Q8IVU1 814 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 SLC35G2Q8TBE7 412 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 GAB3Q8WWW8 586 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 COA7Q96BR5 231 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 TAAR9Q96RI9 348 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 NOL10Q9BSC4 688 aaKnown RBP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 TACO1Q9BSH4 297 aaKnown RBP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 GTPBP4Q9BZE4 634 aaKnown RBP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 MCOLN1Q9GZU1 580 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 EPB41L4BQ9H329 900 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 SCOCQ9UIL1 159 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 USP18Q9UMW8 372 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 EFCAB6Q5THR3 1501 aa8.07□□□□□ -1.12
HMGB1P32-201ENST00000425971 CEP152O94986 1710 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 MST1RQ04912 1400 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 TEX51A0A1B0GUA7 166 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 OFD1O75665 1012 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 JUNBP17275 347 aaPredicted RBP8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 PFKLP17858 780 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 CD83Q01151 205 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 MALLQ13021 153 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 PHF19Q5T6S3 580 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 CATIPQ7Z7H3 387 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 MZB1Q8WU39 189 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 HPS3Q969F9 1004 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 WRNIP1Q96S55 665 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 DDX20Q9UHI6 824 aaKnown RBP8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 RCAN3Q9UKA8 241 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 MBD5Q9P267 1494 aa8.06□□□□□ -1.12
HMGB1P32-201ENST00000425971 ZNF644Q9H582 1327 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 CHD4Q14839 1912 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 A0A0A6YYK5 440 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 AP1G1O43747 822 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 CCT2P78371 535 aaKnown RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 UBE4AQ14139 1066 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 GALEQ14376 348 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 ZNF267Q14586 743 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 GRM3Q14832 879 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 DGKDQ16760 1214 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 TMEM200BQ69YZ2 307 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 DPP8Q6V1X1 898 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 PRR23BQ6ZRT6 265 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 PRR18Q8N4B5 295 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 PPM1NQ8N819 430 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 LINC00482Q8N8I6 264 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 FATE1Q969F0 183 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 HIST1H2AHQ96KK5 128 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 ZSWIM3Q96MP5 696 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 HIST1H2AJQ99878 128 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 FDXACB1Q9BRP7 624 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 SOX7Q9BT81 388 aa8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 C11orf84Q9BUA3 381 aaPredicted RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 NSUN3Q9H649 340 aaKnown RBP8.05□□□□□ -1.12
HMGB1P32-201ENST00000425971 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 SEMA7AO75326 666 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 WASP42768 502 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 SLC16A1P53985 500 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 EPHB3P54753 998 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 RHBDL3P58872 404 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 MAP3K12Q12852 859 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 ARHGAP29Q52LW3 1261 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 GRAMD4Q6IC98 578 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 SLC4A10Q6U841 1118 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 STK32CQ86UX6 486 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 BCL6BQ8N143 479 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 KYQ8NBH2 561 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 PPP1R14CQ8TAE6 165 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 WDR48Q8TAF3 677 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 DIS3LQ8TF46 1054 aaKnown RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 TIFAQ96CG3 184 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 NOX5Q96PH1 765 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 DIRC2Q96SL1 478 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 GCM1Q9NP62 436 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 DCP1AQ9NPI6 582 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 C1orf112Q9NSG2 853 aa8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 CFDP1Q9UEE9 299 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.04□□□□□ -1.12
HMGB1P32-201ENST00000425971 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms