RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 ST8SIA2Q92186 375 aa6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 HAS1Q92839 578 aa6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 HIST1H2AHQ96KK5 128 aa6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 PUS7Q96PZ0 661 aaKnown RBP6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 UIMC1Q96RL1 719 aa6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 HIST1H2AJQ99878 128 aa6.78□□□□□ -1.32
RAB3GAP1-202ENST00000425393 FSBPO95073 299 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 GAAP10253 952 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 TGM1P22735 817 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 NR4A1P22736 598 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MAN2A1Q16706 1144 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 FAM214AQ32MH5 1076 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ATP13A4Q4VNC1 1196 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 LAIR1Q6GTX8 287 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 APBB1IPQ7Z5R6 666 aaPredicted RBP6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PPP1R14CQ8TAE6 165 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 WDR66Q8TBY9 1149 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 LENG9Q96B70 501 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ZG16BQ96DA0 208 aa6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 TYW1Q9NV66 732 aaKnown RBP6.77□□□□□ -1.33
RAB3GAP1-202ENST00000425393 IGBP1P78318 339 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 FSTL1Q12841 308 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 C11orf74Q86VG3 221 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 UNC5BQ8IZJ1 945 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ZNF610Q8N9Z0 462 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PIK3C3Q8NEB9 887 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ATL2Q8NHH9 583 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 STAG1Q8WVM7 1258 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SLC5A5Q92911 643 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CRAMP1Q96RY5 1269 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MLST8Q9BVC4 326 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ENKD1Q9H0I2 346 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ING3Q9NXR8 418 aa6.76□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ALG1L2C9J202 215 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ELL2O00472 640 aaPredicted RBP6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 NRP1O14786 923 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ULK1O75385 1050 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PCDH8O95206 1070 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CFBP00751 764 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 HK1P19367 917 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CD40P25942 277 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ANKRD13AQ8IZ07 590 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CLRN3Q8NCR9 226 aa6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.75□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ALDH1A2O94788 518 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SESN3P58005 492 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ANAPC15P60006 121 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ZBTB41Q5SVQ8 909 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 BROXQ5VW32 411 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 LRRC55Q6ZSA7 311 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PASD1Q8IV76 773 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SYNE4Q8N205 404 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PUS7LQ9H0K6 701 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 USP36Q9P275 1121 aaKnown RBP6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SORCS3Q9UPU3 1222 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PCDHB6Q9Y5E3 794 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MYPNQ86TC9 1320 aa6.74□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PRKD3O94806 890 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 LSP1P33241 339 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 TMPRSS15P98073 1019 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CD69Q07108 199 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 DDB1Q16531 1140 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MBNL2Q5VZF2 373 aaKnown RBP6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 RASSF3Q86WH2 238 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CXorf67Q86X51 503 aaPredicted RBP6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CDYL2Q8N8U2 506 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CPT1CQ8TCG5 803 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 DDX56Q9NY93 547 aaKnown RBP6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
RAB3GAP1-202ENST00000425393 TRIM24O15164 1050 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 HOXA3O43365 443 aaPredicted RBP6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 LY86O95711 162 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ITGB1P05556 798 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PROZP22891 400 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 EVA1CP58658 441 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ERVK-21P61565 698 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 FAPQ12884 760 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 VRK3Q8IV63 474 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PROKR1Q8TCW9 393 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 COG1Q8WTW3 980 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 CPEB1Q9BZB8 566 aaKnown RBP6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MS4A5Q9H3V2 200 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 VTA1Q9NP79 307 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 SLC5A4Q9NY91 659 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 MSRAQ9UJ68 235 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 HS3ST4Q9Y661 456 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 PCSK5Q92824 1860 aa6.72□□□□□ -1.33
RAB3GAP1-202ENST00000425393 ST20-MTHFSA0A0A6YYL1 179 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 SEC24DO94855 1032 aaPredicted RBP6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 ABHD16AO95870 558 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 PFKMP08237 780 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 ZFP36P26651 326 aaKnown RBP6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 CASRP41180 1078 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 INAVAQ3KP66 663 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 ESPNLQ6ZVH7 1005 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 OR52N2Q8NGI0 321 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 FERMT2Q96AC1 680 aa6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 ZNF496Q96IT1 587 aaPredicted RBP6.71□□□□□ -1.34
RAB3GAP1-202ENST00000425393 CPPED1Q9BRF8 314 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms