RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 MUSKO15146 869 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 MEF2AQ02078 507 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 MST1LQ2TV78 715 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 BRDTQ58F21 947 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 C19orf54Q5BKX5 351 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 MBNL2Q5VZF2 373 aaKnown RBP6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 Q6ZRM9 215 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 ELOA2Q8IYF1 753 aaPredicted RBP6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 OR2I1PQ8NGU4 316 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 BRINP2Q9C0B6 783 aa6.1□□□□□ -1.43
HMGB1P49-201ENST00000418882 CAPN14A8MX76 684 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 ITGA10O75578 1167 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 MYBL2P10244 700 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 ADSLP30566 484 aaPredicted RBP6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 NPEPPSP55786 919 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 DUSP2Q05923 314 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 SEPT2Q15019 361 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 ELAVL1Q15717 326 aaKnown RBP6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 CSRP2Q16527 193 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 FKBP15Q5T1M5 1219 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 PGM2L1Q6PCE3 622 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 SPRED1Q7Z699 444 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 GGNQ86UU5 652 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 REPS2Q8NFH8 660 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 FBXO18Q8NFZ0 1043 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 OR5M3Q8NGP4 307 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 STAG1Q8WVM7 1258 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 JADE3Q92613 823 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 CEP95Q96GE4 821 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 FAXDC2Q96IV6 333 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 SMAD5Q99717 465 aaKnown RBP6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 LSM14BQ9BX40 385 aaKnown RBP6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 TRPS1Q9UHF7 1281 aa6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 NOP58Q9Y2X3 529 aaKnown RBP6.09□□□□□ -1.43
HMGB1P49-201ENST00000418882 ALG1L2C9J202 215 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 C1QTNF3-AMACRE9PGA6 284 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 HOXA3O43365 443 aaPredicted RBP6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 AKR1B10O60218 316 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 RBP3P10745 1247 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MTHFD2P13995 350 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 C5AR1P21730 350 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MCAMP43121 646 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 RABGGTBP53611 331 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 WNT3AP56704 352 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MALLQ13021 153 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MRPL49Q13405 166 aaKnown RBP6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 ODF1Q14990 250 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 SGMS1Q86VZ5 419 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 ZCRB1Q8TBF4 217 aaKnown RBP6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 EXTL1Q92935 676 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 FUBP3Q96I24 572 aaKnown RBP eCLIP6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 MPHOSPH9Q99550 1183 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 CPEB1Q9BZB8 566 aaKnown RBP6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 GPRC5DQ9NZD1 345 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 SHROOM4Q9ULL8 1493 aa6.08□□□□□ -1.44
HMGB1P49-201ENST00000418882 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 NRP1O14786 923 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 INSRRP14616 1297 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 SCNN1GP51170 649 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 PRKD1Q15139 912 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 CLUL1Q15846 466 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 ANO4Q32M45 955 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 HS1BP3Q53T59 392 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 MUM1L1Q5H9M0 696 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 MFSD14BQ5SR56 506 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 PRAMEF14Q5SWL7 426 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 ANKS6Q68DC2 871 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 XYLT1Q86Y38 959 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 PPM1NQ8N819 430 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 MB21D1Q8N884 522 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 GPR156Q8NFN8 814 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 IL17DQ8TAD2 202 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 SH3RF3Q8TEJ3 882 aaPredicted RBP6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 ZNF480Q8WV37 535 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 FATE1Q969F0 183 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 IL17RAQ96F46 866 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 GREM2Q9H772 168 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 SIK3Q9Y2K2 1263 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 TESMINQ9Y4I5 508 aa6.07□□□□□ -1.44
HMGB1P49-201ENST00000418882 KLRG2A4D1S0 409 aaPredicted RBP6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 GYPEP15421 78 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 HIBADHP31937 336 aaKnown RBP6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 SLC6A9P48067 706 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 GZMKP49863 264 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 SLC5A3P53794 718 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 AMOTL1Q8IY63 956 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 TRMT2AQ8IZ69 625 aaKnown RBP6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 DPF2Q92785 391 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 MIEF2Q96C03 454 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 FAM89AQ96GI7 184 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 BORCS6Q96GS4 357 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 TEKT5Q96M29 485 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 KCNH6Q9H252 994 aa6.06□□□□□ -1.44
HMGB1P49-201ENST00000418882 RBM12Q9NTZ6 932 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms