RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 IFNEQ86WN2 208 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 MAGEB5Q9BZ81 275 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 PRR12Q9ULL5 1215 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 SMARCA1P28370 1054 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.58■□□□□ 0.72
SHANK3-202ENST00000414786 PLEKHA8P1O95397 391 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 EFHC2Q5JST6 749 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 MTBPQ96DY7 904 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 ELMO2Q96JJ3 720 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 CLMNQ96JQ2 1002 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 DNAJC12Q9UKB3 198 aa19.58■□□□□ 0.72
SHANK3-202ENST00000414786 GRAP2O75791 330 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 GRIN1Q05586 938 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 CDC16Q13042 620 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 HAUS4Q9H6D7 363 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 SCUBE2Q9NQ36 999 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 PDE8BO95263 885 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 GALNT17Q6IS24 598 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 TBC1D19Q8N5T2 526 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 BRD8Q9H0E9 1235 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 ADAMTS1Q9UHI8 967 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 MAPK13O15264 365 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 GCOM2Q9BZD3 368 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 ALDH1A2O94788 518 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 MRPS15P82914 257 aaKnown RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 SURF1Q15526 300 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 TRIM69Q86WT6 500 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 SYNE4Q8N205 404 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 TMA16Q96EY4 203 aaKnown RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 PLEKHA8Q96JA3 519 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 FOPNLQ96NB1 174 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 NMT2O60551 498 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 GNA15P30679 374 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 ATN1P54259 1190 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 E4F1Q66K89 784 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 FOXR1Q6PIV2 292 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 RD3Q7Z3Z2 195 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 CYP7B1O75881 506 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 EPM2AIP1Q7L775 607 aaPredicted RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 DGKHQ86XP1 1220 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 ICA1LQ8NDH6 482 aa19.57■□□□□ 0.72
SHANK3-202ENST00000414786 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.57■□□□□ 0.72
SHANK3-202ENST00000414786 RWDD2BP57060 319 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 MDM2Q00987 491 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-202ENST00000414786 PHKG1Q16816 387 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 FSCBQ5H9T9 825 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 HIBCHQ6NVY1 386 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-202ENST00000414786 FAM167BQ9BTA0 163 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 ENTPD7Q9NQZ7 604 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 FAM136AQ96C01 138 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 CARD14Q9BXL6 1004 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 PYGBP11216 843 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 SDC4P31431 198 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 GABPB1Q06547 395 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-202ENST00000414786 CUL3Q13618 768 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 ZNF658Q5TYW1 1059 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-202ENST00000414786 TOGARAM2Q6ZUX3 1019 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 PCDHB6Q9Y5E3 794 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 DYNC1LI2O43237 492 aaPredicted RBP19.56■□□□□ 0.72
SHANK3-202ENST00000414786 CD274Q9NZQ7 290 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 ITIH6Q6UXX5 1313 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 SLFN12LQ6IEE8 588 aa19.56■□□□□ 0.72
SHANK3-202ENST00000414786 SNAP23O00161 211 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 SERPING1P05155 500 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 CMA1P23946 247 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 RTKN2Q8IZC4 609 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 HOXC10Q9NYD6 342 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 DONSONQ9NYP3 566 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 SPASTQ9UBP0 616 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 ZFP69BQ9UJL9 534 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 ZMYM3Q14202 1370 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 CEP78Q5JTW2 689 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 IYDQ6PHW0 289 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 NUP85Q9BW27 656 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 PUS7LQ9H0K6 701 aaKnown RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 IGFLR1Q9H665 355 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 YY1AP1Q9H869 796 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 ST13P4Q8IZP2 240 aaPredicted RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 RIN3Q8TB24 985 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 GIMAP4Q9NUV9 329 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 KPNA7A9QM74 516 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 PALMO75781 387 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 KRT4P19013 534 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 TNFAIP2Q03169 654 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 E2F4Q16254 413 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 DPCR1Q3MIW9 517 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 HIST1H2AGP0C0S8 130 aaPredicted RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 HIST1H2ADP20671 130 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 SEPT2Q15019 361 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 TAF1CQ15572 869 aaPredicted RBP19.55■□□□□ 0.72
SHANK3-202ENST00000414786 HIST1H2AHQ96KK5 128 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 HIST1H2AJQ99878 128 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 H2AFJQ9BTM1 129 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 MID2Q9UJV3 735 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 ATP11BQ9Y2G3 1177 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 KRT8P05787 483 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 IL13P35225 146 aa19.55■□□□□ 0.72
SHANK3-202ENST00000414786 ARL4CP56559 192 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms