RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 TBX10O75333 385 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 NR1I2O75469 434 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 CCT6AP40227 531 aaKnown RBP16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 TOB1P50616 345 aaPredicted RBP16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 ZP2Q05996 745 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 KCNC3Q14003 757 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 KRT79Q5XKE5 535 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 SLC27A1Q6PCB7 646 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 TMEM87AQ8NBN3 555 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 ASAP3Q8TDY4 903 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 KIFAP3Q92845 792 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 LPPQ93052 612 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 TBC1D32Q96NH3 1257 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 TRIM6Q9C030 488 aaPredicted RBP16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 POLR3FQ9H1D9 316 aaPredicted RBP16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 HCSTQ9UBK5 93 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 DNM3Q9UQ16 869 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 SSX2IPQ9Y2D8 614 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 KIAA1671Q9BY89 1806 aa16.1■□□□□ 0.17
NIF3L1-205ENST00000409588 LINC01565O15544 149 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 USO1O60763 962 aaKnown RBP16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 GPR37L1O60883 481 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 CXCL14O95715 111 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 EFNA5P52803 228 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 CDCA2Q69YH5 1023 aaPredicted RBP16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 PPFIBP1Q86W92 1011 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 VPS52Q8N1B4 723 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 SMG8Q8ND04 991 aaKnown RBP16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 CASP10Q92851 521 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 IFT74Q96LB3 600 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 FZD8Q9H461 694 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 FAN1Q9Y2M0 1017 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 IPPQ9Y573 584 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 PHLPP2Q6ZVD8 1323 aa16.09■□□□□ 0.17
NIF3L1-205ENST00000409588 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 LRRIQ4A6NIV6 560 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 PER2O15055 1255 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 SLC26A4O43511 780 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 CTSAP10619 480 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 ARF4P18085 180 aaPredicted RBP16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 NAMPTP43490 491 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 MAPK6Q16659 721 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 AMHR2Q16671 573 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 PLPP4Q5VZY2 271 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 ARL6IP4Q66PJ3 421 aaKnown RBP16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 MCTP1Q6DN14 999 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 APBB1IPQ7Z5R6 666 aaPredicted RBP16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 TIPINQ9BVW5 301 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 C17orf75Q9HAS0 396 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 CD320Q9NPF0 282 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 INPP5FQ9Y2H2 1132 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 PCDHB6Q9Y5E3 794 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 PLXNA4Q9HCM2 1894 aa16.08■□□□□ 0.16
NIF3L1-205ENST00000409588 ARL5CA6NH57 179 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 MEIS3P2A8K0S8 358 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 CSPG5O95196 566 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 GLP2RO95838 553 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 C1RP00736 705 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 GJB2P29033 226 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 PBX3P40426 434 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 ITIH3Q06033 890 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 GPR65Q8IYL9 337 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 NT5C3AQ9H0P0 336 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 ZBP1Q9H171 429 aa16.07■□□□□ 0.16
NIF3L1-205ENST00000409588 A0A087WWV3 80 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 HIDE1A8MVS5 230 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 ACKR2O00590 384 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 N4BP3O15049 544 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 BMP15O95972 392 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 PDCP20941 246 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 CLUL1Q15846 466 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 MAEAQ7L5Y9 396 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 ZNF280BQ86YH2 543 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 DEPTORQ8TB45 409 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 SNX29Q8TEQ0 813 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 ADPGKQ9BRR6 497 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 COLEC11Q9BWP8 271 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 PHF7Q9BWX1 381 aaPredicted RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 EMILIN2Q9BXX0 1053 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 EIF2AQ9BY44 585 aaKnown RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 BHMT2Q9H2M3 363 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 EPHX3Q9H6B9 360 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 DDX19AQ9NUU7 478 aaKnown RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 BARX2Q9UMQ3 279 aaPredicted RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 RBM19Q9Y4C8 960 aaKnown RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 ARIH1Q9Y4X5 557 aaPredicted RBP16.06■□□□□ 0.16
NIF3L1-205ENST00000409588 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms