RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 GPC5P78333 572 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 DSG1Q02413 1049 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 MAPK8IP2Q13387 824 aaPredicted RBP18.69■□□□□ 0.58
CHMP3-203ENST00000409225 PLA2G4FQ68DD2 849 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 RNF168Q8IYW5 571 aaPredicted RBP18.69■□□□□ 0.58
CHMP3-203ENST00000409225 RDM1Q8NG50 284 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 BICD2Q8TD16 824 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 SHDQ96IW2 340 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 B3GALT6Q96L58 329 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 RPP25Q9BUL9 199 aaKnown RBP18.69■□□□□ 0.58
CHMP3-203ENST00000409225 PRKD2Q9BZL6 878 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 PLEKHA4Q9H4M7 779 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 COL4A3BPQ9Y5P4 624 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 LAMTOR5O43504 91 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 PSMD10O75832 226 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 ITGA4P13612 1032 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 NCLP19338 710 aaKnown RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 HOXA11P31270 313 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 ATXN1P54253 815 aaKnown RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 CSTF1Q05048 431 aaKnown RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 SNW1Q13573 536 aaKnown RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 RNF20Q5VTR2 975 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 JPH2Q9BR39 696 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 BCO2Q9BYV7 579 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 MINDY3Q9H8M7 445 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 ZDHHC7Q9NXF8 308 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 COL4A3Q01955 1670 aa18.68■□□□□ 0.58
CHMP3-203ENST00000409225 KMT2BQ9UMN6 2715 aaPredicted RBP18.68■□□□□ 0.58
CHMP3-203ENST00000409225 SPTBN2O15020 2390 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 MIA3Q5JRA6 1907 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 KANSL1LA0AUZ9 987 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 SPTLC1O15269 473 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 PAPLNO95428 1278 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 EFEMP2O95967 443 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 SRGAP2CP0DJJ0 459 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 FSHRP23945 695 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 RCAN1P53805 252 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 UBXN2BQ14CS0 331 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 ZNF528Q3MIS6 628 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 ADCK5Q3MIX3 580 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 PARM1Q6UWI2 310 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 ANO5Q75V66 913 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 SMG8Q8ND04 991 aaKnown RBP18.67■□□□□ 0.58
CHMP3-203ENST00000409225 FGF14Q92915 247 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 UBN1Q9NPG3 1134 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 FBXO4Q9UKT5 387 aa18.67■□□□□ 0.58
CHMP3-203ENST00000409225 MTF2Q9Y483 593 aaPredicted RBP18.67■□□□□ 0.58
CHMP3-203ENST00000409225 CCDC196A0A1B0GTZ2 297 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 ARL5CA6NH57 179 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 PRPF3O43395 683 aaKnown RBP18.66■□□□□ 0.58
CHMP3-203ENST00000409225 RPL17P18621 184 aaKnown RBP18.66■□□□□ 0.58
CHMP3-203ENST00000409225 SDHBP21912 280 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 MLH1P40692 756 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 SCNN1GP51170 649 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 USP11P51784 963 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 NPEPPSP55786 919 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 SRGAP1Q7Z6B7 1085 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 PRPF31Q8WWY3 499 aaKnown RBP18.66■□□□□ 0.58
CHMP3-203ENST00000409225 ATRIPQ8WXE1 791 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 GAD1Q99259 594 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 RNF39Q9H2S5 420 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 CHST7Q9NS84 486 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 IPPQ9Y573 584 aa18.66■□□□□ 0.58
CHMP3-203ENST00000409225 ACACBO00763 2458 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 NR1I2O75469 434 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 NTHL1P78549 312 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 FGD1P98174 961 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 AKAP17AQ02040 695 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 DSC1Q08554 894 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 MLF2Q15773 248 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 LILRA6Q6PI73 481 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 B3GNT9Q6UX72 402 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 GRASPQ7Z6J2 395 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 GPR161Q8N6U8 529 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 CNNM3Q8NE01 707 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 CCDC148Q8NFR7 591 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 TBCKQ8TEA7 893 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 TMEM143Q96AN5 459 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 COLEC11Q9BWP8 271 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 APOL6Q9BWW8 343 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 EIF2AQ9BY44 585 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 GPR62Q9BZJ7 368 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 BMP2KQ9NSY1 1161 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 MIOSQ9NXC5 875 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 VPS54Q9P1Q0 977 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 CDV3Q9UKY7 258 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 SMG5Q9UPR3 1016 aaKnown RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 HES2Q9Y543 173 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 PCDHGA2Q9Y5H1 932 aa18.65■□□□□ 0.58
CHMP3-203ENST00000409225 ZFP37Q9Y6Q3 630 aaPredicted RBP18.65■□□□□ 0.58
CHMP3-203ENST00000409225 MYH15Q9Y2K3 1946 aa18.64■□□□□ 0.58
CHMP3-203ENST00000409225 MTCL1Q9Y4B5 1905 aaKnown RBP18.64■□□□□ 0.58
CHMP3-203ENST00000409225 DCDC2BA2VCK2 349 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 FAM170BA6NMN3 283 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 ZMYND10O75800 440 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 TDP2O95551 362 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 PSMC5P62195 406 aa18.64■□□□□ 0.57
CHMP3-203ENST00000409225 LAMTOR4Q0VGL1 99 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms