RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 C1orf131Q8NDD1 294 aaKnown RBP18.17■□□□□ 0.5
NUP50-203ENST00000407019 EPS8L1Q8TE68 723 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 KIFAP3Q92845 792 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 SAAL1Q96ER3 474 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 WNK4Q96J92 1243 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 KIFC3Q9BVG8 833 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 NEUROG2Q9H2A3 272 aa18.17■□□□□ 0.5
NUP50-203ENST00000407019 NOCTQ9UK39 431 aaKnown RBP18.17■□□□□ 0.5
NUP50-203ENST00000407019 UTP11Q9Y3A2 253 aaKnown RBP18.17■□□□□ 0.5
NUP50-203ENST00000407019 GOLGA6L10A0A0M3HER8 536 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 MIF4GDA9UHW6 222 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 DAPK3O43293 454 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 NR3C2P08235 984 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 CNGA1P29973 690 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 HSD17B3P37058 310 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 PTENP60484 403 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 DALRD3Q5D0E6 543 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 DNAJC21Q5F1R6 531 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 NAA35Q5VZE5 725 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 KCTD16Q68DU8 428 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 KRT39Q6A163 491 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 SPIRE2Q8WWL2 714 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 SEC14L1Q92503 715 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 KREMEN1Q96MU8 473 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 FAM114A2Q9NRY5 505 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 RSPH14Q9UHP6 348 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 HACL1Q9UJ83 578 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 GRIN2DO15399 1336 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 EIF3HO15372 352 aaKnown RBP eCLIP18.16■□□□□ 0.5
NUP50-203ENST00000407019 BACE1P56817 501 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 TGFB2P61812 414 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 POU5F1Q01860 360 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 DCAF15Q66K64 600 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 NOP9Q86U38 636 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 MICALL2Q8IY33 904 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 SCYL3Q8IZE3 742 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 BSNDQ8WZ55 320 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 SHC3Q92529 594 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 SEMA4DQ92854 862 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 CCDC127Q96BQ5 260 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 CEP170P1Q96L14 293 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 PCDHB18PQ96TA0 734 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 CELF4Q9BZC1 486 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 C17orf75Q9HAS0 396 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 AS3MTQ9HBK9 375 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 TMEM8AQ9HCN3 771 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 GABBR1Q9UBS5 961 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 RRP15Q9Y3B9 282 aaKnown RBP18.16■□□□□ 0.5
NUP50-203ENST00000407019 ALG6Q9Y672 507 aa18.16■□□□□ 0.5
NUP50-203ENST00000407019 TULP1O00294 542 aaPredicted RBP18.15■□□□□ 0.5
NUP50-203ENST00000407019 MAFGO15525 162 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 DKC1O60832 514 aaKnown RBP eCLIP18.15■□□□□ 0.5
NUP50-203ENST00000407019 CHRNB2P17787 502 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 CEP85LQ5SZL2 805 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 NBPF12Q5TAG4 269 aaPredicted RBP18.15■□□□□ 0.5
NUP50-203ENST00000407019 KDM7AQ6ZMT4 941 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 SAMD7Q7Z3H4 446 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 UBL4BQ8N7F7 174 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 TMC2Q8TDI7 906 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 ATP6V0A1Q93050 837 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 ATP6V1G3Q96LB4 118 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 RAB17Q9H0T7 212 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.15■□□□□ 0.59e-9■■■■■ 111.8
NUP50-203ENST00000407019 COQ4Q9Y3A0 265 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 DOCK1Q14185 1865 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 SYNGAP1Q96PV0 1343 aa18.15■□□□□ 0.5
NUP50-203ENST00000407019 GOLGA6L10A6NI86 522 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 HMGB1P1B2RPK0 211 aaPredicted RBP18.14■□□□□ 0.5
NUP50-203ENST00000407019 CYP26A1O43174 497 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 GZMAP12544 262 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 GPC3P51654 580 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 ZNF211Q13398 564 aaPredicted RBP18.14■□□□□ 0.5
NUP50-203ENST00000407019 MTMR3Q13615 1198 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 SNRNP48Q6IEG0 339 aaKnown RBP18.14■□□□□ 0.5
NUP50-203ENST00000407019 REPS2Q8NFH8 660 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 ALG3Q92685 438 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 NTPCRQ9BSD7 190 aaKnown RBP18.14■□□□□ 0.5
NUP50-203ENST00000407019 TMOD4Q9NZQ9 345 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 NR2E1Q9Y466 385 aa18.14■□□□□ 0.5
NUP50-203ENST00000407019 PARP14Q460N5 1801 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 TMEM110-MUSTN1A8MSY1 372 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 MTA2O94776 668 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 GMPSP49915 693 aaPredicted RBP18.14■□□□□ 0.49
NUP50-203ENST00000407019 OAZ1P54368 228 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 UAP1Q16222 522 aaPredicted RBP18.14■□□□□ 0.49
NUP50-203ENST00000407019 USP37Q86T82 979 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 SLC47A2Q86VL8 602 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 NSUN6Q8TEA1 469 aaKnown RBP18.14■□□□□ 0.49
NUP50-203ENST00000407019 FBXL18Q96ME1 805 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 NT5C1BQ96P26 610 aa18.14■□□□□ 0.49
NUP50-203ENST00000407019 NFKBIEO00221 500 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 ZNF862O60290 1169 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 PSAPP07602 524 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 KCNA2P16389 499 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 GTF2H1P32780 548 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 BAG6P46379 1132 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 DR1Q01658 176 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 SLC39A4Q6P5W5 647 aa18.13■□□□□ 0.49
NUP50-203ENST00000407019 ADAT2Q7Z6V5 191 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms