RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 SLC17A8Q8NDX2 589 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 LRRC15Q8TF66 581 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 MRPL38Q96DV4 380 aaKnown RBP22.91■■□□□ 1.26
PDGFA-204ENST00000405692 MRPL4Q9BYD3 311 aaKnown RBP22.91■■□□□ 1.26
PDGFA-204ENST00000405692 LRRC27Q9C0I9 530 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 CUEDC2Q9H467 287 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 CWH43Q9H720 699 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 PCDHA7Q9UN72 937 aa22.91■■□□□ 1.26
PDGFA-204ENST00000405692 SLC16A4O15374 487 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 OFD1O75665 1012 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 PPM1AP35813 382 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 CACNB1Q02641 598 aaPredicted RBP22.9■■□□□ 1.26
PDGFA-204ENST00000405692 RNASELQ05823 741 aaKnown RBP22.9■■□□□ 1.26
PDGFA-204ENST00000405692 DCAF4L1Q3SXM0 396 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 ATF7IP2Q5U623 682 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 MICALL1Q8N3F8 863 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 MYCT1Q8N699 235 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 COLGALT1Q8NBJ5 622 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 SPATA32Q96LK8 384 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 ZNF558Q96NG5 402 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 PYM1Q9BRP8 204 aaKnown RBP22.9■■□□□ 1.26
PDGFA-204ENST00000405692 PANK2Q9BZ23 570 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 SCAND2PQ9GZW5 306 aaPredicted RBP22.9■■□□□ 1.26
PDGFA-204ENST00000405692 ZHX3Q9H4I2 956 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 PDZD7Q9H5P4 517 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 INPP5FQ9Y2H2 1132 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 GIT1Q9Y2X7 761 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 CHD9Q3L8U1 2897 aa22.9■■□□□ 1.26
PDGFA-204ENST00000405692 FNDC1Q4ZHG4 1894 aaPredicted RBP22.9■■□□□ 1.26
PDGFA-204ENST00000405692 ZNF131P52739 623 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 AXDND1Q5T1B0 1012 aaPredicted RBP22.89■■□□□ 1.25
PDGFA-204ENST00000405692 CDR2LQ86X02 465 aaPredicted RBP22.89■■□□□ 1.25
PDGFA-204ENST00000405692 THNSL1Q8IYQ7 743 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 PDILTQ8N807 584 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 IQUBQ8NA54 791 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 KLHL23Q8NBE8 558 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 PLAGL2Q9UPG8 496 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 TNFSF13BQ9Y275 285 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 NLRC5Q86WI3 1866 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 ZMYM2Q9UBW7 1377 aa22.89■■□□□ 1.25
PDGFA-204ENST00000405692 MEIS3P2A8K0S8 358 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 TRAK2O60296 914 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 ALDH7A1P49419 539 aaKnown RBP22.88■■□□□ 1.25
PDGFA-204ENST00000405692 NCKAP1LP55160 1127 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 AMPD3Q01432 767 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 UBE3AQ05086 875 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 TIGD5Q53EQ6 642 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 SHC4Q6S5L8 630 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 KCNT2Q6UVM3 1135 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 LRRC55Q6ZSA7 311 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 TMEM161BQ8NDZ6 487 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 PPM1EQ8WY54 764 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 DDX12PQ92771 950 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 FAM193BQ96PV7 902 aaPredicted RBP22.88■■□□□ 1.25
PDGFA-204ENST00000405692 TBC1D13Q9NVG8 400 aa22.88■■□□□ 1.25
PDGFA-204ENST00000405692 MAPTP10636 758 aaKnown RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 CCDC85BQ15834 202 aaPredicted RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 NT5DC1Q5TFE4 455 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 HAUS6Q7Z4H7 955 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 FAM178BQ8IXR5 827 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 LEO1Q8WVC0 666 aaPredicted RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 KCNN1Q92952 543 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 ACO2Q99798 780 aaKnown RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 APOL6Q9BWW8 343 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 TNMDQ9H2S6 317 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 NXF3Q9H4D5 531 aaKnown RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 MAGEF1Q9HAY2 307 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 SEL1LQ9UBV2 794 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 PARP2Q9UGN5 583 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 PUF60Q9UHX1 559 aaKnown RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 HES2Q9Y543 173 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 MYO9BQ13459 2157 aa22.87■■□□□ 1.25
PDGFA-204ENST00000405692 COL4A4P53420 1690 aaPredicted RBP22.87■■□□□ 1.25
PDGFA-204ENST00000405692 GRM6O15303 877 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 INPPL1O15357 1258 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 FGF18O76093 207 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 ITGB1P05556 798 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 GAP43P17677 238 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 KRT17Q04695 432 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 RESP18Q5W5W9 173 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 DYMQ7RTS9 669 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 ALG13Q9NP73 1137 aaKnown RBP22.86■■□□□ 1.25
PDGFA-204ENST00000405692 SPG21Q9NZD8 308 aa22.86■■□□□ 1.25
PDGFA-204ENST00000405692 A0A087X0B3 334 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 ARL5CA6NH57 179 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 MYMKA6NI61 221 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 TTLL13PA6NNM8 815 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 K7ENM7 598 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 ZC3H11AO75152 810 aaKnown RBP eCLIP22.85■■□□□ 1.25
PDGFA-204ENST00000405692 ANP32AP39687 249 aaKnown RBP22.85■■□□□ 1.25
PDGFA-204ENST00000405692 PLCB3Q01970 1234 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 ADALQ6DHV7 355 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 ZPBP2Q6X784 338 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 TAS1R3Q7RTX0 852 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 SPPL3Q8TCT6 385 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 PPP2R3CQ969Q6 453 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 DHX58Q96C10 678 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 RPS6KC1Q96S38 1066 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 GAD1Q99259 594 aa22.85■■□□□ 1.25
PDGFA-204ENST00000405692 TCHPQ9BT92 498 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms