RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 TTC3P53804 2025 aa9.25□□□□□ -0.93
BRCC3-205ENST00000399026 CHD7Q9P2D1 2997 aa9.25□□□□□ -0.93
BRCC3-205ENST00000399026 ADGRA3Q8IWK6 1321 aa9.25□□□□□ -0.93
BRCC3-205ENST00000399026 INO80B-WBP1J3KQ70 363 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 ENPP3O14638 875 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 B4GALT5O43286 388 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 TSPAN1O60635 241 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 ERLIN2O94905 339 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 EDN1P05305 212 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 PTENP60484 403 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 KRT85P78386 507 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 DSC3Q14574 896 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 MXD4Q14582 209 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 PAN2Q504Q3 1202 aaKnown RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 NAALADL2Q58DX5 795 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 ODR4Q5SWX8 454 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CDCA2Q69YH5 1023 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 TWF2Q6IBS0 349 aaKnown RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 SHC4Q6S5L8 630 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 C1orf186Q6ZWK4 172 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CDR2LQ86X02 465 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 DEFB123Q8N688 67 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 SYT2Q8N9I0 419 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 RNF169Q8NCN4 708 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 PHOSPHO2Q8TCD6 241 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 KCNG4Q8TDN1 519 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 LEO1Q8WVC0 666 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 LARP4BQ92615 738 aaKnown RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CPB2Q96IY4 423 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 YME1L1Q96TA2 773 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 REEP2Q9BRK0 252 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 PANK2Q9BZ23 570 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 INO80BQ9C086 356 aaPredicted RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CCSER1Q9C0I3 900 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CERS4Q9HA82 394 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 RC3H2Q9HBD1 1191 aaKnown RBP9.24□□□□□ -0.93
BRCC3-205ENST00000399026 AGPAT5Q9NUQ2 364 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 CCDC39Q9UFE4 941 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 MTUS1Q9ULD2 1270 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 PCDHA7Q9UN72 937 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 ATG2AQ2TAZ0 1938 aa9.24□□□□□ -0.93
BRCC3-205ENST00000399026 SFI1A8K8P3 1242 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 C9IYK1 514 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 ASAP2O43150 1006 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 SLC26A4O43511 780 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 CUTAO60888 179 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 KRT18P05783 430 aaKnown RBP9.23□□□□□ -0.93
BRCC3-205ENST00000399026 FGFR1P11362 822 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 ZSCAN20P17040 1043 aaPredicted RBP9.23□□□□□ -0.93
BRCC3-205ENST00000399026 STAT6P42226 847 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 SARSP49591 514 aaKnown RBP9.23□□□□□ -0.93
BRCC3-205ENST00000399026 PEX3P56589 373 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 CDC42EP1Q00587 391 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 AMHR2Q16671 573 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 LONRF3Q496Y0 759 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 ARSHQ5FYA8 562 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 RRAGBQ5VZM2 374 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 SRGAP1Q7Z6B7 1085 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 NPAS4Q8IUM7 802 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 ZBTB8OSQ8IWT0 167 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 DEPTORQ8TB45 409 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 KIFAP3Q92845 792 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 LPPQ93052 612 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 TOP1MTQ969P6 601 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 IFT74Q96LB3 600 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 DRC1Q96MC2 740 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 ZNF576Q9H609 170 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 RGS18Q9NS28 235 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 C1orf112Q9NSG2 853 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 CFAP45Q9UL16 551 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 LRFN2Q9ULH4 789 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 USP20Q9Y2K6 914 aa9.23□□□□□ -0.93
BRCC3-205ENST00000399026 LINC01553A4QN01 128 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 FAM187AA6NFU0 413 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 EPOPA6NHQ4 379 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 CCDC169A6NNP5 214 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 MEIS3P2A8K0S8 358 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 SLC16A4O15374 487 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-205ENST00000399026 TBCAO75347 108 aaKnown RBP9.22□□□□□ -0.93
BRCC3-205ENST00000399026 PRKCBP05771 671 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 ATF7P17544 494 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-205ENST00000399026 GUCY2CP25092 1073 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 NAMPTP43490 491 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 NPTX2P47972 431 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 NUCB2P80303 420 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 HTRA4P83105 476 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-205ENST00000399026 TAP1Q03518 808 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 DMP1Q13316 513 aaPredicted RBP9.22□□□□□ -0.93
BRCC3-205ENST00000399026 PPP2R5AQ15172 486 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 TMEM132AQ24JP5 1023 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 RESP18Q5W5W9 173 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 ATL3Q6DD88 541 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 CCDC73Q6ZRK6 1079 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 SLC24A5Q71RS6 500 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 DYMQ7RTS9 669 aa9.22□□□□□ -0.93
BRCC3-205ENST00000399026 ARNTL2Q8WYA1 636 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms