RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
SPOCK1-202ENST00000394945 CCT7Q99832 543 aa16.51■□□□□ 0.23
SPOCK1-202ENST00000394945 INTS2Q9H0H0 1204 aaKnown RBP16.51■□□□□ 0.23
SPOCK1-202ENST00000394945 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 KIF19Q2TAC6 998 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ANKMY2Q8IV38 441 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 EME1Q96AY2 570 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ANKRD27Q96NW4 1050 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ACAP3Q96P50 834 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 CPVLQ9H3G5 476 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 CCDC134Q9H6E4 229 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ARHGEF9O43307 516 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 CAND2O75155 1236 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ERGIC2Q96RQ1 377 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 KCNK16Q96T55 309 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 DNAJC7Q99615 494 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 POTEB3A0JP26 581 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 POTECB2RU33 542 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 TFRCP02786 760 aaKnown RBP16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 KCNJ1P48048 391 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 TAF1BQ53T94 588 aaPredicted RBP16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 POTEBQ6S5H4 581 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 GIMAP8Q8ND71 665 aaPredicted RBP16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 ALKBH8Q96BT7 664 aaKnown RBP16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 BRIP1Q9BX63 1249 aa16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 NXF1Q9UBU9 619 aaKnown RBP16.5■□□□□ 0.23
SPOCK1-202ENST00000394945 RPS6KA5O75582 802 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 AP1G2O75843 785 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 UCHL3P15374 230 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 ANXA13P27216 316 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 TFDP2Q14188 446 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 SYDE1Q6ZW31 735 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 HSPH1Q92598 858 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 ATP6V1E2Q96A05 226 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 DSG1Q02413 1049 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 GALNT4Q8N4A0 578 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 ANO3Q9BYT9 981 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 IPO11Q9UI26 975 aaKnown RBP16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 ZNF609O15014 1411 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 CLDN3O15551 220 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 DEAF1O75398 565 aaPredicted RBP16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 KRT75O95678 551 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 GLI1P08151 1106 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 DAB2P98082 770 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 OR6B2Q6IFH4 312 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 RHPN2Q8IUC4 686 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 PASD1Q8IV76 773 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 METTL13Q8N6R0 699 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 XXYLT1Q8NBI6 393 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 INPP5FQ9Y2H2 1132 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 E2F6O75461 281 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 APOA1P02647 267 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 ALCAMQ13740 583 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 FBXL13Q8NEE6 735 aa16.49■□□□□ 0.23
SPOCK1-202ENST00000394945 XPO1O14980 1071 aaKnown RBP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 TRIM49P0CI25 452 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 TRIM49CP0CI26 452 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 CACNA2D1P54289 1103 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 ARHGEF16Q5VV41 709 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 CCNYL1Q8N7R7 359 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 CCDC17Q96LX7 622 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 ESRRBO95718 433 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 SRGAP2BP0DMP2 458 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 MYLK4Q86YV6 388 aaPredicted RBP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 SERPINB12Q96P63 405 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 AGPAT1Q99943 283 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 PSMC3IPQ9P2W1 217 aaPredicted RBP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 CPDO75976 1380 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 O00370 1275 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 TMCC1O94876 653 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 SKOR1P84550 965 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 EFTUD2Q15029 972 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 MFN1Q8IWA4 741 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 NGRNQ9NPE2 291 aaKnown RBP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 RGL1Q9NZL6 768 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 TLR3O15455 904 aaKnown RBP16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 NMT2O60551 498 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 OLFML3Q9NRN5 406 aa16.48■□□□□ 0.23
SPOCK1-202ENST00000394945 KRT8P05787 483 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 KCNA4P22459 653 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 PMS1P54277 932 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 HERVK_113P62684 666 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 TFAMQ00059 246 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 EPS8L3Q8TE67 593 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 NMD3Q96D46 503 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 SNX25Q9H3E2 840 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 GTSE1Q9NYZ3 720 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 SUCLA2Q9P2R7 463 aaPredicted RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 HPSEQ9Y251 543 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 MED7O43513 233 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 CD44P16070 742 aaKnown RBP16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 COPB2P35606 906 aa16.47■□□□□ 0.23
SPOCK1-202ENST00000394945 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms