RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 TNRC6CQ9HCJ0 1690 aaKnown RBP14.18□□□□□ -0.14
NFKB1-202ENST00000394820 EML1O00423 815 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 MEIS2O14770 477 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 RGL2O15211 777 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 MSH4O15457 936 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 GAS8O95995 478 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 ALAS1P13196 640 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 ALDH3A1P30838 453 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 MAPK4P31152 587 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 SMTNP53814 917 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 DGKZQ13574 1117 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 LRRC55Q6ZSA7 311 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 CAVIN3Q969G5 261 aa14.18□□□□□ -0.14
NFKB1-202ENST00000394820 EIF2AK1Q9BQI3 630 aaKnown RBP14.18□□□□□ -0.14
NFKB1-202ENST00000394820 PDGFDQ9GZP0 370 aaPredicted RBP14.18□□□□□ -0.14
NFKB1-202ENST00000394820 METTL14Q9HCE5 456 aaKnown RBP14.18□□□□□ -0.14
NFKB1-202ENST00000394820 COMTP21964 271 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 SMARCA1P28370 1054 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 RNASELQ05823 741 aaKnown RBP14.17□□□□□ -0.14
NFKB1-202ENST00000394820 DNAJC3Q13217 504 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 BIRC2Q13490 618 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 PRKG1Q13976 671 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 DACT2Q5SW24 774 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 STRIP1Q5VSL9 837 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 ZDHHC15Q96MV8 337 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 EMSYQ7Z589 1322 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 RRP1BQ14684 758 aaKnown RBP14.17□□□□□ -0.14
NFKB1-202ENST00000394820 BSPRYQ5W0U4 402 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 PPP1R21Q6ZMI0 780 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 TRIM59Q8IWR1 403 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 ZNF668Q96K58 619 aaPredicted RBP14.17□□□□□ -0.14
NFKB1-202ENST00000394820 ERP44Q9BS26 406 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 GLIS2Q9BZE0 524 aaPredicted RBP14.17□□□□□ -0.14
NFKB1-202ENST00000394820 TTYH3Q9C0H2 523 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 CASZ1Q86V15 1759 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 POTEJP0CG39 1038 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 SNHG28P0DPA3 235 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 CREB1P16220 341 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 ISLR2Q6UXK2 745 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 FMNL3Q8IVF7 1028 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 DCAF4Q8WV16 495 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 STMN2Q93045 179 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 PI4K2AQ9BTU6 479 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 PARVGQ9HBI0 331 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.17□□□□□ -0.14
NFKB1-202ENST00000394820 AGTPBP1Q9UPW5 1226 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 ABCB11O95342 1321 aa14.17□□□□□ -0.14
NFKB1-202ENST00000394820 DDX3XO00571 662 aaKnown RBP eCLIP14.16□□□□□ -0.143e-9■■□□□ 12.8
NFKB1-202ENST00000394820 TMEM119Q4V9L6 283 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 HGSNATQ68CP4 663 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 KAT5Q92993 513 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 ZBTB10Q96DT7 871 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 TMEM237Q96Q45 408 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 GDF3Q9NR23 364 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 USH1CQ9Y6N9 552 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 MYO3BQ8WXR4 1341 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 BTAF1O14981 1849 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 EXOC1LA0A1B0GW35 172 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 TESPA1A2RU30 521 aaPredicted RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 F5H423 210 aaPredicted RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 F8VZ95 297 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 POLR2MP0CAP2 368 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 PDE6CP51160 858 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 PEX3P56589 373 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 OVGP1Q12889 678 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 DCUN1D2Q6PH85 259 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 CPNE8Q86YQ8 564 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 INPP4AQ96PE3 977 aaPredicted RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 NUP85Q9BW27 656 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 KIF9Q9HAQ2 790 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 NOP53Q9NZM5 478 aaKnown RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 NYAP2Q9P242 653 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 CPSF2Q9P2I0 782 aaKnown RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 IGKV6D-41A0A0C4DH26 115 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 TARSP26639 723 aaKnown RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 RAD23BP54727 409 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 ARSHQ5FYA8 562 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 C6orf118Q5T5N4 469 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 RNF207Q6ZRF8 634 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 TMC3Q7Z5M5 1100 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 CNPY4Q8N129 248 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 FNBP1Q96RU3 617 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 ZNF577Q9BSK1 485 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 INTS2Q9H0H0 1204 aaKnown RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 LRRC4CQ9HCJ2 640 aa14.16□□□□□ -0.14
NFKB1-202ENST00000394820 METTL5Q9NRN9 209 aaKnown RBP14.16□□□□□ -0.14
NFKB1-202ENST00000394820 CCDC88AQ3V6T2 1871 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 TMEM150BA6NC51 233 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 CD58P19256 250 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SOX5P35711 763 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 LRRC36Q1X8D7 754 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 PALB2Q86YC2 1186 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 ANKMY2Q8IV38 441 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 SUGP1Q8IWZ8 645 aaKnown RBP14.15□□□□□ -0.14
NFKB1-202ENST00000394820 LRRC8CQ8TDW0 803 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 RFFLQ8WZ73 363 aa14.15□□□□□ -0.14
NFKB1-202ENST00000394820 KIFC3Q9BVG8 833 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms